New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1102886 =	85 (1.140)	7 (0.100)	7/238	NT	8.3%	intergenic (+20/‑98)	ttg2E/ttg2F	toluene‑tolerance protein/BolA family protein
	?	NC_002947	1102932 =	76 (1.090)					intergenic (+66/‑52)	ttg2E/ttg2F	toluene‑tolerance protein/BolA family protein

ACCCGGGAACCCGGCAATTTCTCTTCAAGGAAGCTTTTAACTTCTACGGCCTGCATGCTCAACCTCAATCGGCGCCCGATGCGCACGGGTCGGCCATCATACAAAAAAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1103039‑1102886 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaggggcTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGTTCCCGGGTCGAAGTTGAAGGCGAAGGCTGCAACTTCCAGTTGAACGT  >  NC_002947/1102932‑1103078                                                                                                                                                                                                                                                                                                               ACCCGGGAACCCGGCAATTTCTCTTCAAGGAAGCTTTTAACTTCTACGGCCTGCATGCTCAACCTCAATCGGCGCCCGATGCGCACGGGTCGGCCATCATACAAAAAAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAG                                                                                                                                                         >  2:1549631/1‑150  CCCGGGAACCCGGCAATTTCTCTTCAAGGAAGCTTTTAACTTCTACGGCCTGCATGCTCAACCTCAATCGGCGCCCGATGCGCACGGGTCGGCCATCATACAAAAAAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGG                                                                                                                                                        <  1:555249/150‑1  CCCGGGAACCCGGCAATTTCTCTTCAAGGAAGCTTTTAACTTCTACGGCCTGCATGCTCAACCTCAATCGGCGCCCGATGCGCACGGGTCGGCCATCATACAAAAAAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGG                                                                                                                                                        <  2:352987/150‑1   CCGGGAACCCGGCAATTTCTCTTCAAGGAAGCTTTTAACTTCTACGGCCTGCATGCTCAACCTCAATCGGCGCCCGATGCGCACGGGTCGGCCATCATACAAAAAAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGG                                                                                                                                                       >  2:1774332/1‑150                                                                                                         AAAAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGT                                                 >  1:757584/1‑150                                                                                                          AAAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGTGGGGCTTTGTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAA                                                                           <  2:1894578/123‑1                                                                                                          AAAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAA                                                                           >  1:1894578/1‑123                                                                                                                CCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCC                                                     <  1:502515/139‑1                                                                                                                CCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCC                                                     >  2:502515/1‑139                                                                                                                     CCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGTTCCCGGGTCGAA                                     <  2:757584/150‑1                                                                                                                      CTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGTTCCCGGGTCGAAG                                    >  2:1158002/1‑150                                                                                                                                                    GAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGTTCCCGGGTCGAAGTTGAAGGCGAAGGCTGCAACTTCCAGTTGA      >  1:1284640/1‑150                                                                                                                                                    GAGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCACCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGTTCCCGGGTCGAAGTTGAAGGCGAAGGCTGCAACTTCCAGTTGA      >  2:1727558/1‑150                                                                                                                                                     AGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGTTCCCGGGTCGAAGTTGAAGGCGAAGGCTGCAACTTCCAGTTGAA     <  1:1863852/150‑1                                                                                                                                                     AGGGGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGTTCCCGGGTCGAAGTTGAAGGCGAAGGCTGCAACTTCCAGTTGAA     <  2:630337/150‑1                                                                                                                                                        GGCTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGTTCCCGGGTCGAAGTTGAAGGCGAAGGCTGCAACTTCCAGTTGAACGT  >  2:763519/1‑150                                                                                                                                                                                                                                                                                                               ACCCGGGAACCCGGCAATTTCTCTTCAAGGAAGCTTTTAACTTCTACGGCCTGCATGCTCAACCTCAATCGGCGCCCGATGCGCACGGGTCGGCCATCATACAAAAAAGCCCCTCGCCTGCGAAGCCCAACGAAGGCTTCGCTGACCGAGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/1103039‑1102886 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgaggggcTTTTTTGTATGATGGCCGACCCGTGCGCATCGGGCGCCGATTGAGGTTGAGCATGCAGGCCGTAGAAGTTAAAAGCTTCCTTGAAGAGAAATTGCCGGGTTCCCGGGTCGAAGTTGAAGGCGAAGGCTGCAACTTCCAGTTGAACGT  >  NC_002947/1102932‑1103078

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.