| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1651040 | 82 (1.100) | 9 (0.130) | 9/238 | NT | 10.4% | coding (62/2043 nt) | PP_1446 | TonB‑dependent receptor |
| ? | NC_002947 | = 1651049 | 78 (1.120) | coding (53/2043 nt) | PP_1446 | TonB‑dependent receptor | |||||
GCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCCTGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1650884‑1651040‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggctggCTGCAT‑CCCCCAGCCAGGCCGTAGAACTTGAGCCGCAGGTCATCACCGCCAACCCGCTGGGTAACCGCCAACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTTAA < NC_002947/1651049‑1650902 GCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCC < 1:1596160/150‑1GCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCC < 1:808950/150‑1 GACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCCGTTGGCGGTTACCCCGCGGGTTGGCGGTGATGCCCTGCGGCTCAAGTTCTACGGCCTG > 1:26130/1‑150 CACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCCTGGC < 1:1680460/150‑1 CACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCCTGGC < 2:898774/150‑1 CGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCCTGGCTGG < 2:1334242/150‑1 TTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCCTGGCTGGCTGCAT‑CC > 2:752503/1‑150 GTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCCTGGCTGGCTGCAT‑CCCCCAGCCAG < 1:752503/150‑1 CCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCCTGGCTGGCTGCAT‑CCCCCAGCCAGGCC > 2:1833726/1‑147 CCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGC‑‑‑‑CTGGCTGCAT‑CCCCCAGCCAGGCCGTAGAAC < 1:636854/150‑1 CCCAGGCTGACGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCCTGGCTGGCTGCAT‑CCCCCAGCCAGGCC < 1:1833726/147‑1 TGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCCTGGCTGGCTGCAT‑CCCCCAGCCAGGC < 1:647446/94‑1 TGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTCGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCCTGGCTGGCTGCAT‑CCCCCAGCCAGGC > 2:647446/1‑94 CTCAAGTTCTACGGCCTGGCTGG‑GGGATGCAGCCAGCCAGGCCGTAGAACTTGAGCCGCAGGTCATCACCGCCAACCCGCTGGGTAACCGCCAACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCA < 1:710665/144‑1 CTCAAGTTCTACGGCCTGGCTGG‑GGGATGCAGCCAGCCAGGCCGTAGAACTTGAGCCGCAGGTCATCACCGCCAACCCGCTGGGTAACCGCCAACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCA > 2:710665/1‑144 CTGGCTGGCGGCAT‑CCCCCAGCCAGGCCGTAGAACTTGAGCCGCAGGTCATCACCGCCACCCCGCTGGGGAACCGCCAACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAAC < 2:1565387/150‑1 CTGGCTGCAT‑CCCCCAGCCAGGCCGTAGAACTTGAGCCGCAGGTCATCACCGCCAACCCGCTGGGTAACCGCCAACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTT < 2:429615/150‑1 CTGGCTGCAT‑CCCCCAGCCAGGCCGTAGAACTTGAGCCGCAGGTCATCACCGCCAACCCGCTGGGTAACCGCCAACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTT > 2:1490189/1‑150 CTGGCTGCAT‑CCCCCAGCCAGGCCGTAGAACTTGAGCCGCAGGTCATCACCGCCAACCCGCTGGGTAACCGCCAACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTT < 2:1099068/150‑1 TGGCTGCAT‑CCCCCAGCCAGGCCGTAGAACTTGAGCCGCAGGTCATCACCGCCAACCCGCTGGGTAACCGCCAACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTTA > 1:817803/1‑150 GGCTGCAT‑CCCCCAGCCAGGCCGTAGAACTTGAGCCGCAGGTCATCACCGCCAACCCGCTGGGTAACCGCCAACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTTAA < 2:1741795/150‑1 GCTGCAT‑CCCCCAGCCAGGCCGTAGAACTTGAGCCGCAGGTCATCACCGCCAACCCGCTGGGTAACCGCCAACTGGCCGCCCCCAGCACCGTGCTC < 2:1820110/96‑1 GCTGCAT‑CCCCCAGCCAGGCCGTAGAACTTGAGCCGCAGGTCATCACCGCCAACCCGCTGGGTAACCGCCAACTGGCCGCCCCCAGCACCGTGCTC > 1:1820110/1‑96 GCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGACCTGCGGCTCAAGTTCTACGGCCTGGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1650884‑1651040‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggctggCTGCAT‑CCCCCAGCCAGGCCGTAGAACTTGAGCCGCAGGTCATCACCGCCAACCCGCTGGGTAACCGCCAACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTTAA < NC_002947/1651049‑1650902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |