New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2247118 =	66 (0.880)	4 (0.060)	4/242	NT	6.1%	coding (2524/3297 nt)	PP_1983	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
	?	NC_002947	2247154 =	61 (0.860)					coding (2488/3297 nt)	PP_1983	PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase

GCGTGGCGCTGATCCCCGACCACGGCACCACACCGGCCGACCTGCTCAAACGTGCCGATATCGCCCTGTACCGGGCCAAGGACTCCGGTCGCAACACCACCCAGCTGTTTCACACCACCATGCAGAAGGCCGCCAGCGAGCGCCTGCGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2247270‑2247118 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatggTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAGGCGCTGGCCA  >  NC_002947/2247154‑2247302                                                                                                                                                                                                                                                                                                                GCGTGGCGCTGTTTCCCGGCCGCGGAACCACACCGGCCGACTTGCTCAAGCGTGCCGATATCGCCCTGTACCGGGCCAAGGACTCCGGTCGCAACACCACCCAGCTGTTTCACACCACCATGCAGAAGGCCGCCAGCGAGCGCCTGCGCA                                                                                                                                                          <  2:12186/150‑1  CGTGGCGCTGATCCCCGACCACGGCACCACACCGGCCGACCTGCTCAAACGTGCCGATATCGCCCTGTACCGGGCCAAGGACTCCGGTCGCAACACCACCCAGCTGTTTCACACCACCATGCAGAAGGCCGCCAGCGAGCGCCTGCGCAT                                                                                                                                                         <  1:1505666/150‑1  CGTGGCGCTGATCCCCGACCACGGCACCACACCGGCCGACCTGCTCAAACGTGCCGATATCGCCCTGTACCGGGCCAAGGACTCCGGTCGCAACACCACCCAGCTGTTTCACACCACCATGCAGAAGGCCGCCAGCGAGCGCCTGCGCAT                                                                                                                                                         <  2:1527078/150‑1   GTGGCGCTGATCCCCGACCACGGCACCACACCGGCCGACCTGCTCAAACGTGCCGATATCGCCCTGTACCGGGCCAAGGACTCCGGTCGCAACACCACCCAGCTGTTTCACACCACCATGCAGAAGGCCGCCAGCGAGCGCCTGCGCATG                                                                                                                                                        <  2:1822763/150‑1                                                                                                                    CACCATGCAGAAGGCCGCCAGCGAGCGCCTGCGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAG                                                                              >  1:784837/1‑111                                                                                                                    CACCATGCAGAAGGCCGCCAGCGAGCGCCTGCGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAG                                                                              <  2:784837/111‑1                                                                                                                      CCATGCAGAAGGCCGCCAGCGAGCGCCTGCGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCA                                     >  2:985156/1‑150                                                                                                                         TGCAGAAGGCCGCCAGCGAGCGCCTGCGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGC                                  <  1:985156/150‑1                                                                                                                                                    GCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAG            >  1:26672/1‑145                                                                                                                                                    GCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAG            <  2:26672/145‑1                                                                                                                                                     CATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAGGCGCTG      <  1:1171688/150‑1                                                                                                                                                         GTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAGGCGCTGGCCA  <  2:224061/150‑1                                                                                                                                                                                                                                                                                                                GCGTGGCGCTGATCCCCGACCACGGCACCACACCGGCCGACCTGCTCAAACGTGCCGATATCGCCCTGTACCGGGCCAAGGACTCCGGTCGCAACACCACCCAGCTGTTTCACACCACCATGCAGAAGGCCGCCAGCGAGCGCCTGCGCATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/2247270‑2247118 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcatggTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAGGCGCTGGCCA  >  NC_002947/2247154‑2247302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.