New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 2247118 =66 (0.880)4 (0.060) 4/242 NT 6.1% coding (2524/3297 nt) PP_1983 PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase
?NC_002947 2247154 = 61 (0.860)coding (2488/3297 nt) PP_1983 PAS/PAC/GAF sensor‑containing diguanylate cyclase/phosphodiesterase

TGCCAGCGCAACAGTACTTCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAGGCGCTGGCCA  >  NC_002947/2247006‑2247302
                                                                                                                                                    |                                                                                                                                                    
tgCCAGCGCAACAGTACTTCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCAtggtg                                                                                                                                                     <  2:1336179/150‑1 (MQ=255)
tgCCAGCGCAACAGTACTTCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCAtggtg                                                                                                                                                     <  2:1007256/150‑1 (MQ=255)
 gCCAGCGCAACAGTACTTCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCAtggtgg                                                                                                                                                    >  2:1672486/1‑150 (MQ=255)
  ccAGCGCAACAGTACTTCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGACGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATggtggt                                                                                                                                                   >  1:580740/1‑150 (MQ=255)
   cAGCGCAACAGTACTTCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGTCACGGGCCAGGGCCAGGCGCATGTCGTTTTCCATGCGCAGGCGCTCGCTGGCAGCCGTCTGCATGgtggtg                                                                                                                                                  <  1:706555/150‑1 (MQ=255)
     gcgcAACAGTACTTCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGtgtg                                                                                                                                                <  2:24584/150‑1 (MQ=255)
        cAACAGTACTTCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGaaa                                                                                                                                             <  1:249393/150‑1 (MQ=255)
         aaCAGTACTTCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAAc                                                                                                                                            >  2:210066/1‑150 (MQ=255)
         aaCAGTACTTCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAAc                                                                                                                                            >  2:622163/1‑150 (MQ=255)
            aGTACTTCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCAAGGGGGCGGCGCCGGCCGCTCTCCAAGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGGGTGAAACAGc                                                                                                                                         >  1:224061/1‑150 (MQ=255)
                 ttCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACa                                                                                                                                           >  1:211907/1‑143 (MQ=255)
                 ttCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACa                                                                                                                                           <  2:211907/143‑1 (MQ=255)
                     gCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCTGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGgtggtg                                                                                                                                >  1:507062/1‑150 (MQ=255)
                      cACCGACTATTCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGgtgt                                                                                                                               >  2:1268851/1‑150 (MQ=255)
                      cACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCTGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGgtgt                                                                                                                               <  2:507062/150‑1 (MQ=255)
                       aCCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGtt                                                                                                                              <  2:618916/150‑1 (MQ=255)
                       aCCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGtt                                                                                                                              >  2:146484/1‑150 (MQ=255)
                       aCCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGACGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGtt                                                                                                                              <  2:580740/150‑1 (MQ=255)
                        ccGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTg                                                                                                                             >  1:56916/1‑150 (MQ=255)
                         cgacgaTGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGc                                                                                                                            <  1:1820923/150‑1 (MQ=255)
                         cgacgaTGCGGGTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGc                                                                                                                            <  2:804398/150‑1 (MQ=255)
                             gaTGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGaaa                                                                                                                                             >  2:1730584/1‑129 (MQ=255)
                             gaTGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGaaa                                                                                                                                             <  1:1730584/129‑1 (MQ=255)
                                gctgTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGa                                                                                                                     <  1:1268851/147‑1 (MQ=255)
                                 cGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAg                                                                                                                    <  1:836863/150‑1 (MQ=255)
                                  ggTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGt                                                                                                                   <  1:622163/150‑1 (MQ=255)
                                  ggTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGAGGTGTTGCGACCGGAGt                                                                                                                   >  1:1585918/1‑150 (MQ=255)
                                   gTTNTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTc                                                                                                                  >  2:1187394/1‑150 (MQ=255)
                                       ctcaaacgtgccgatatcgccctgtaccgggccaaggactccggtcgcaacaccacccagctgtttcacaccaCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCAtggtg                                                                                                                                                     <  2:784837‑M1/38‑1 (MQ=255)
                                       ctcaaacgtgccgatatcgccctgtaccgggccaaggactccggtcgcaacaccacccagctgtttcacaccaCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCAtggtg                                                                                                                                                     >  1:784837‑M1/74‑111 (MQ=255)
                                             tcATCCACCTGCGGCTGGAAGTGCGGTGCAAGTTCGCCACGAGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGccctg                                                                                                        <  2:1058704/149‑3 (MQ=255)
                                              cATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGAAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGt                                                                                                       >  1:1173867/1‑150 (MQ=255)
                                               aTCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGGTTAGTTTTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTa                                                                                                      >  1:1058704/1‑150 (MQ=255)
                                                  cACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGAACAg                                                                                                   >  1:79284/1‑150 (MQ=255)
                                                   aCCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAgg                                                                                                  >  2:1597131/1‑150 (MQ=255)
                                                   aCCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAAAAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAgg                                                                                                  >  2:1416650/1‑150 (MQ=255)
                                                    ccTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAggg                                                                                                 <  1:801860/150‑1 (MQ=255)
                                                         ggCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGata                                                                                            <  2:1585918/150‑1 (MQ=255)
                                                          gCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCg                                                                                                         <  1:814554/136‑1 (MQ=255)
                                                          gCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCg                                                                                                         >  2:814554/1‑136 (MQ=255)
                                                            tGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGAGATCg                                                                                         >  2:1079972/1‑150 (MQ=255)
                                                                agtgcagtgcCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCAc                                                                                     <  1:210066/150‑1 (MQ=255)
                                                                    cagtgcCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGttt                                                                                 <  2:27862/150‑1 (MQ=255)
                                                                         ccAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGGGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCa                                                                            >  1:1742972/1‑150 (MQ=255)
                                                                          cAGCTCGCCACGGGCCAGGGCCAGTCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCATTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAg                                                                           <  2:965599/150‑1 (MQ=255)
                                                                                  cACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCg                                                                   >  1:1321618/1‑150 (MQ=255)
                                                                                  cACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGGCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCg                                                                   >  1:1138715/1‑150 (MQ=255)
                                                                                       gccagggccaggCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGtgtg                                                              >  1:789845/1‑150 (MQ=255)
                                                                                        ccagggccaggCGCAGGTCGTTTTCCATGCGCAGGCTCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTgtgg                                                             >  1:1132889/1‑150 (MQ=255)
                                                                                        ccagggccaggCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAg                                                                              <  1:1088268/133‑1 (MQ=255)
                                                                                        ccagggccaggCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAg                                                                              >  2:1088268/1‑133 (MQ=255)
                                                                                         cagggccaggCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAAAAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTgtggt                                                            <  1:1416650/150‑1 (MQ=255)
                                                                                              ccaggCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGt                                                       <  1:146484/150‑1 (MQ=255)
                                                                                                    gcAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCgg                                                 <  1:1187394/150‑1 (MQ=255)
                                                                                                    gcAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCgg                                                 <  1:1597131/150‑1 (MQ=255)
                                                                                                       ggTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGa                                              <  2:1683263/150‑1 (MQ=255)
                                                                                                        gTCGTTTTCCATGCGAAGGCGCTCGCCGGCGGCCTTCTGTAGGGTGGTGTGAAAAAGCAGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGAACAGGGCTATATCGGCACGTTTGAGCAGATCGGGCGGTGTGGGGCCCTGGACGGGGaa                                             >  2:906994/1‑149 (MQ=255)
                                                                                                           gTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCCGGGTGGTGTTGCGACTGGCGTCTATGGCCCGGTATAGTGCTATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAg                                          <  1:1672486/150‑1 (MQ=255)
                                                                                                              caccatgcagaaggccgccagcgagcgcctgcgcatggTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAg                                                                              <  2:784837‑M2/73‑1 (MQ=255)
                                                                                                              caccatgcagaaggccgccagcgagcgcctgcgcatggTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAg                                                                              >  1:784837‑M2/39‑111 (MQ=255)
                                                                                                                ccatgcagaaggccgccagcgagcgcctgcgcatggTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCa                                     >  2:985156‑M2/37‑150 (MQ=255)
                                                                                                                 CATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCAc                                    <  2:1822763‑M1/150‑1 (MQ=255)
                                                                                                                  ATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACg                                   <  2:1527078‑M1/150‑1 (MQ=255)
                                                                                                                  ATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACg                                   <  1:1505666‑M1/150‑1 (MQ=255)
                                                                                                                   tgcagaaggccgccagcgagcgcctgcgcatggTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGc                                  <  1:985156‑M2/117‑1 (MQ=255)
                                                                                                                   TGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGCTTGAGCAAGTCGGCCGGTGTGGTTCCGCGGCCGGGAAACAGCGCCACGc                                  <  2:12186‑M1/150‑1 (MQ=255)
                                                                                                                         ggCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGc                            <  1:1306022/150‑1 (MQ=255)
                                                                                                                           cgctcgctGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTg                          <  2:56916/150‑1 (MQ=255)
                                                                                                                           cgctcgctGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCAGATGCTg                          <  2:789845/150‑1 (MQ=255)
                                                                                                                            gctcgctGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTGGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTgg                         <  1:1647674/150‑1 (MQ=255)
                                                                                                                              tctctGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGc                       >  2:1716752/4‑150 (MQ=255)
                                                                                                                                gctGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGt                     >  2:1171688/1‑150 (MQ=255)
                                                                                                                                  tGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGTAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTa                   >  2:1583256/1‑150 (MQ=255)
                                                                                                                                  tGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTa                   >  1:59567/1‑150 (MQ=255)
                                                                                                                                    gcggcTTCCTGCATGGTGGTTTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTATAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGTGATCAGCGCCACGCCGATCCTGTGCGTTAcc                 >  2:889481/1‑150 (MQ=255)
                                                                                                                                      ggcCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTg               <  2:1505666/150‑1 (MQ=255)
                                                                                                                                         cTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATc                                                                                          >  1:969409/1‑72 (MQ=255)
                                                                                                                                         cTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATc                                                                                          <  2:969409/72‑1 (MQ=255)
                                                                                                                                         cTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAg            <  2:59567/150‑1 (MQ=255)
                                                                                                                                              gcatggTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAg            >  1:26672‑M2/7‑145 (MQ=255)
                                                                                                                                              gcatggTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAg            <  2:26672‑M2/139‑1 (MQ=255)
                                                                                                                                               catggTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAGGCGCTg      <  1:1171688‑M2/145‑1 (MQ=255)
                                                                                                                                                   gTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAGGCGCTGGCCa  <  2:224061‑M2/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TGCCAGCGCAACAGTACTTCGGCACCGACGATGCGGTTGTCGCGGGCATCCACCTGCGGCTGGAAGTGCAGTGCCAGCTCGCCACGGGCCAGGGCCAGGCGCAGGTCGTTTTCCATGCGCAGGCGCTCGCTGGCGGCCTTCTGCATGGTGGTGTGAAACAGCTGGGTGGTGTTGCGACCGGAGTCCTTGGCCCGGTACAGGGCGATATCGGCACGTTTGAGCAGGTCGGCCGGTGTGGTGCCGTGGTCGGGGATCAGCGCCACGCCGATGCTGGGCGTTACCTGCAGGCGCTGGCCA  >  NC_002947/2247006‑2247302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.