| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2676223 | 66 (0.880) | 4 (0.060) | 4/242 | NT | 5.9% | intergenic (‑46/‑192) | PP_2344/PP_2345 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 2676254 | 65 (0.910) | intergenic (‑77/‑161) | PP_2344/PP_2345 | hypothetical protein/hypothetical protein | |||||
GCAATACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAGGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2676069‑2676223‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccaATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCACATCAAATACCCCGCCCTCACCTTCAAGGCCGGCCAGCGTGCCTTGCGACACATCCG < NC_002947/2676254‑2676107 GCAATACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAGG < 1:926784/150‑1GCAATACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAGG < 2:679695/150‑1 CAATACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAGGG < 2:1678877/150‑1 AATACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCGGCGAGGGG > 2:1042874/1‑150 ACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAGGGGCCA < 1:775200/150‑1 ACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAGGGGCCA < 1:775433/150‑1 ACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAGGGGCCA < 2:58900/150‑1 TGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAGGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCA > 1:155733/1‑105 TGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAGGGGCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCA < 2:155733/105‑1 GATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAGGGGCCAATACAGCCACCTACAGGTGTGTTATCTG < 1:1861339/86‑1 GATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAGGGGCCAATACAGCCACCTACAGGTGTGTTATCTG > 2:1861339/1‑86 GCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCACATCAAATACCCCGCCCTCACCTTCAAGGCCGGCCAGCGTGCCTTGCGACACATC > 2:181164/1‑150 GCCAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCACATCAAATACCCCGCCCTCACCTTCAAGGCCGGCCAGCGTGCCTTGCGACACATC > 2:646655/1‑150 CAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCACATCAAATACCCCGCCCTCACCTTCAAGGCCGGCCAGCGTGCCTTGCGACACATCCG > 2:1354415/1‑150 CAATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCACCGCGCAGATCAGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCAGATCAAATACTCCTCCCTCACCTTCAAGGCCGGCCAGCGTGCCTTGCGACACATCCG > 1:988316/1‑150 GCAATACCCCGACATCGGCCGCCTGCAGGCCACGCTCGCGGATGTGTCGCAAGGCACGCTGGCCGGCCTTGAAGGTGAGGGCGGGGTATTTGATGTGGATGGCGCTCATGGCGGGTCTCTTGGGCATAGGAGCAGCCTTGTGCTGCGAGGGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2676069‑2676223‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggccaATACAGCCACCTACAGGTGTGTTATCTGTAATGGCCCCTCGCAGCACAAGGCTGCTCCTATGCCCAAGAGACCCGCCATGAGCGCCATCCACATCAAATACCCCGCCCTCACCTTCAAGGCCGGCCAGCGTGCCTTGCGACACATCCG < NC_002947/2676254‑2676107 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |