New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3394863	47 (0.630)	4 (0.060)	4/246	NT	8.1%	coding (321/948 nt)	PP_2998	2‑dehydropantoate 2‑reductase
	?	NC_002947	= 3394881	45 (0.620)					coding (339/948 nt)	PP_2998	2‑dehydropantoate 2‑reductase

GTCAAGGCGGCCATCGAAGCCGTAGACGTTGGCGTGACCGATTTGGTGGTGGTGCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3394711‑3394863 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacTTCGGCCAGGATGTCCTCGTGGCCGA  <  NC_002947/3394881‑3394856                                                                                                                                                                                     GTCAAGGCGGCCATCGAAGCCGTAGACGTTGGCGTGACCGATTTGGTGGTGGTGCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCTCTGCAGAACGGGCTCGGC                               >  1:573553/1‑150 GTCAAGGCGGCCATCGAAGCCGTAGACGTTGGCGTGACCGATTTGGTGGTGGTGCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGC                               >  2:76296/1‑150    AAGGCGGCCATCGAAGCCGTAGACGTTGGCGTGACCGATTTGGTGGTGGTGCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCAC                            >  1:451232/1‑150                                                                                AGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACTTCGGCCAGGATGTCCTCGTGGCCGA  <  1:302587/100‑1                                                                                AGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACTTCGGCCAGGATGTCCTCGTGGCCGA  >  2:302587/1‑100                                                                                                CCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACTTCGGCCAGGATGTCCTCGTGG      <  1:1782200/80‑1                                                                                                CCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACTTCGGCCAGGATGTCCTCGTGG      >  2:1782200/1‑80                                                                                                                                                                                     GTCAAGGCGGCCATCGAAGCCGTAGACGTTGGCGTGACCGATTTGGTGGTGGTGCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3394711‑3394863 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccacTTCGGCCAGGATGTCCTCGTGGCCGA  <  NC_002947/3394881‑3394856

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.