New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3394863	47 (0.630)	4 (0.060)	4/246	NT	8.1%	coding (321/948 nt)	PP_2998	2‑dehydropantoate 2‑reductase
	?	NC_002947	= 3394881	45 (0.620)					coding (339/948 nt)	PP_2998	2‑dehydropantoate 2‑reductase

GACCGATTTGGTGGTGGTGCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGCTGACGCCCCGCGTGCAGGCCATC  >  NC_002947/3394746‑3395028                                                                                                                                        |                                                                                                                                                    gACCGATTTGGTGGTGGTGCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGa                                                                                                                                       >  2:1758383/1‑150 (MQ=255)     gATTTGGTGGTGGTGCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCgg                                                                                                                                   <  2:885786/150‑1 (MQ=255)     gATTTGGTGGTGGTGCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCgg                                                                                                                                   <  2:248327/150‑1 (MQ=255)          ggtggtggtGCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTAGCAGATGTGGTGGGTCGCGAGCGGGTgct                                                                                                                              <  1:730978/150‑1 (MQ=255)           gtggtggtgCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTgctg                                                                                                                             <  1:1686980/150‑1 (MQ=255)           gtggtggtgCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTgctg                                                                                                                             >  1:1628395/1‑150 (MQ=255)            tggtggtgCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAgtggtg                                                                                                                                               <  1:1088252/131‑1 (MQ=255)            tggtggtgCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAgtggtg                                                                                                                                               >  2:1088252/1‑131 (MQ=255)            tggtggtgCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTgctgg                                                                                                                            >  1:908722/1‑150 (MQ=255)                     tGGTGAAGTCGTTTAACACTGCCGAGGCGATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGGGCTGTAGCTGAAGAACGGGCTCGGCCACGAGGGCAACCTGGCCGAAGTGGTGGGGCGCGGGCGGGCGCTGGGTGGCAAgg                                                                                                                   >  2:1182340/1‑149 (MQ=255)                          aaGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGCGTTCTGGCTGGCAAGACCTAt                                                                                                              >  1:1533445/1‑150 (MQ=255)                              cGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAATGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTcg                                                                                                          <  2:451232/150‑1 (MQ=255)                                tttCACACTGCCGAGGCCATCGCCGGTGCACACGGGCTGATATGCGCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACTTGCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCGAGGCCTAtcgcggg                                                                                                        >  2:270455/1‑144 (MQ=255)                                      acTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTgctgg                                                                                                                            <  1:1620551/124‑1 (MQ=255)                                      acTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTgctgg                                                                                                                            >  2:1620551/1‑124 (MQ=255)                                        tGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTgctgg                                                                                                                            <  1:1003549/122‑1 (MQ=255)                                        tGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTgctgg                                                                                                                            >  2:1003549/1‑122 (MQ=255)                                            gAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCCGCGTGctcctc                                                                                            <  2:1818315/150‑1 (MQ=255)                                                             ccACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATcca                                                                           >  1:28428/1‑149 (MQ=255)                                                              cACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCGCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCcgc                                                                          >  1:902948/1‑150 (MQ=255)                                                               aCGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCcgcg                                                                         >  1:1394726/1‑150 (MQ=255)                                                                cGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCgcgc                                                                        <  2:1394726/150‑1 (MQ=255)                                                                cGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGGGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCgcgc                                                                        >  2:1313626/1‑150 (MQ=255)                                                                      gATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGgtgt                                                                  <  2:1377645/150‑1 (MQ=255)                                                                       aTAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGtgtg                                                                 >  1:1388876/1‑150 (MQ=255)                                                                             ccACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGggcggc                                                           >  1:652154/1‑150 (MQ=255)                                                                                  gACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACa                                                      <  1:848642/150‑1 (MQ=255)                                                                                     gCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGAc                                                   >  2:1678739/1‑150 (MQ=255)                                                                                          tGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCCATGTCGGTGGGTTGCTCTTCGCGCGGGGCTCTATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCa                                              <  2:1162035/150‑1 (MQ=255)                                                                                           gCTGTCGCTGCACAACGGGCTCGGCCACGAGGATATCCTGGTCGAGGTGGTGGGTCCCGAGCGGGTGCCGGCTGGCAAGACCTATGTCGGCGGCGTGTTCCTCGCGCCGGGCTTTATGCGCGCCGGTGTGGCCGGCAAACAGACTTTCAt                                             <  1:746379/150‑1 (MQ=255)                                                                                             tGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCGCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCg                                           >  2:400046/1‑150 (MQ=255)                                                                                               tCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTAATCGGc                                         <  2:652154/150‑1 (MQ=255)                                                                                                 gCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGa                                       >  2:706185/1‑150 (MQ=255)                                                                                                   tGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGc                                     >  1:1790956/1‑150 (MQ=255)                                                                                                    gCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCt                                    >  1:869235/1‑150 (MQ=255)                                                                                                       gAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGa                                 <  2:869235/150‑1 (MQ=255)                                                                                                        aaCGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGAc                                <  2:238207/150‑1 (MQ=255)                                                                                                          cGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACgg                              <  2:1790956/150‑1 (MQ=255)                                                                                                             gCTCGGCCACGAGGAAATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGGCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCa                           >  1:892019/1‑150 (MQ=255)                                                                                                               tCGGCCACGAGGACATCCTGGCCGACGTGGTGGATTGCTAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCGTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGc                         >  1:151583/1‑150 (MQ=255)                                                                                                               tCGGCCACGAGGACATCCTGGCCGAAgtggccgagcccgttctgcagcgacagcaccagcgtctgtgggcctatcagcccgtgggcaccggcgatggcct                                                                           >  2:302587‑M2/1‑26 (MQ=255)                                                                                                               tCGGCCACGAGGACATCCTGGCCGAAgtggccgagcccgttctgcagcgacagcaccagcgtctgtgggcctatcagcccgtgggcaccggcgatggcct                                                                           <  1:302587‑M2/100‑75 (MQ=255)                                                                                                                   ccACGAGGACATCCTGGCCGAAgtggccgagcccgttctgcagcgacagcaccagcgtctgtgggcctatcagcccgtgg                                                                                           >  2:1782200‑M2/1‑22 (MQ=255)                                                                                                                   ccACGAGGACATCCTGGCCGAAgtggccgagcccgttctgcagcgacagcaccagcgtctgtgggcctatcagcccgtgg                                                                                           <  1:1782200‑M2/80‑59 (MQ=255)                                                                                                                     aCGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGCTGACgg                   >  1:1131183/1‑149 (MQ=255)                                                                                                                     aCGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGATGGCTGGCAAGACCTATGTCGGCGGCATGCTCCTCGCGCCGGGCTCGATCCGCGCCGGGTGGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGCTGACGc                   >  2:688091/1‑150 (MQ=255)                                                                                                                        aGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGCTGACGcccc                >  1:742254/1‑150 (MQ=255)                                                                                                                            cATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGCTGACGCCCCGCGt            >  1:1404672/1‑150 (MQ=255)                                                                                                                                cTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGCTGACGCCCCGCGTGCAg        <  2:246019/150‑1 (MQ=255)                                                                                                                                cTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGCTGACGCCCCGCGTGCAg        <  2:573553/150‑1 (MQ=255)                                                                                                                                 tGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGCTGACGCCCCGCGTGCAgg       <  2:1474616/150‑1 (MQ=255)                                                                                                                                     cGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGCTGACGCCCCGCGTGCAGGCCAt   >  2:372571/1‑150 (MQ=255)                                                                                                                                     cGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGCTGACGCCCCGCGTGCAGGCCAt   >  2:373165/1‑150 (MQ=255)                                                                                                                                      gAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGCTGACGCCCCGCGTGCAGGCCATc  <  2:1628395/150‑1 (MQ=255)                                                                                                                                        |                                                                                                                                                    GACCGATTTGGTGGTGGTGCTGGTGAAGTCGTTTCACACTGCCGAGGCCATCGCCGGTGCCCACGGGCTGATAGGCCCACAGACGCTGGTGCTGTCGCTGCAGAACGGGCTCGGCCACGAGGACATCCTGGCCGAAGTGGTGGGTCGCGAGCGGGTGCTGGCTGGCAAGACCTATGTCGGCGGCGTGCTCCTCGCGCCGGGCTCGATCCGCGCCGGTGTGGCCGGCAAACAGACTTTCATCGGCGAGCTCGACGGCCAGCTGACGCCCCGCGTGCAGGCCATC  >  NC_002947/3394746‑3395028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.