New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3634824 | 104 (1.390) | 10 (0.140) | 8/248 | NT | 9.0% | coding (1179/2481 nt) | PP_3202 | transporter |
? | NC_002947 | = 3634872 | 100 (1.370) | coding (1227/2481 nt) | PP_3202 | transporter |
CCGCGCTGCTCTGTGATGCGGTCGGTTTTGCCGTGCTCATGATCATTCAGATACAGGTGATCCAGGACCTGGCCGTTATCGCCAGCCTGGGCGTGGCGGTGCTGATCTTCACCAACCTGATTCTGCTGCCGGTGCTGCTCTCCTACGTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3634673‑3634824 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCTC‑G‑GCCTCTTCGGCGCGCAGGCTGCGCCGCGCCGCACGGGCACTGACGCCCACGTAGGAGAGCAGCACCGGCAGCAGAATCAGGTTGGTGAAGATCAGCACCGCCACGCCCAGGCTGGCGATAACGGCCAGGTCCTGGATCACCTG < NC_002947/3634872‑3634726 CCGCGCTGCTCTGTGATGCGGTCGGTTTTGCCGTGCTCATGATCATTCAGATACAGGTGATCCAGGACCTGGCCGTTATCGCCAGCCTGGGCGTGGCGGTGCTGATCTTCACCAACCTGATTCTGCTGCCGGTGCTGCTCTCCTACGTGG < 2:512978/150‑1 ATGATCATTCAGATACAGGTGATCCAGGACCTGGCCGTTATCGCCAGCCTGGGCGTGGCGGTGCTGATCTTCACCAACCTGATTCTGCTGCCGGTGCTGCTCTCCTACGTGGGCCTC‑G‑GCCTCTTCGGCGCGCAGGCTGCGCCGCGCCGC > 2:153337/1‑150 ATGATCATTCAGATACAGGTGATCCAGGACCTGGCCGTTATCGCCAGCCTGGGCGTGGCGGTGCTGATCTTCACCAACCTGATTCTGCTGCCGGTGCTGCTCTCCTACGTGGGCCTC‑G‑GCCTCTTCGGCGCGCAGGCTGCGCCGCGCCGC > 2:1596125/1‑150 ATTCAGATACAGGTGATCCAGGACCTGGCCGTTATCGCCAGCCTGGGCGTGGCGGTGCTGATCTTCACCAACCTGATTCTGCTGCCGGTGCTGCTCTCCTACGTGGGCGTCAGTGCCCGTTCGGCGCGCAGGCTGCGCCGCGCCGCACGG > 1:1627530/1‑150 ATTCAGATACAGGTGATCCAGGACCTGGCCGTTATCGCCAGCCTGGGCGTGGCGGTGCTGATCTTCACCAACCTGATTCTGCTGCCGGTGCTGCTCTCCTACGTGGGCGTCAGTGCCCGTTCGGCGCGCAGGCTGCGCCGCGCCGCACGG < 2:1627530/150‑1 GATACAGGTGATCCAGGACCTGGCCGTTATCGCCAGCCTGGGCGTGGCGGTGCTGATCTTCACCAACCTGATTCTGCTGCCGGTGCTGCCCGCC‑CCGCTGGCCTC‑G‑GCCTCTTCGGCGCGCAGGCTGCGCCGCGCCGCACGGGCACTGAC < 1:56009/150‑1 GATACAGGTGATCCAGGACCTGGCCGTTATCGCCAGCCTGGGCGTGGCGGTGCTGATCTTCACCAACCTGATTCTGCTGCCGGTGCTGCCCGCC‑CCGCTGGCCTC‑G‑GCCTCTTCGGCGCGCAGGCTGCGCCGCGCCGCACGGGCACTGAC > 2:56009/1‑150 ATCCAGGACCTGGCCGTTATCGCCAGCCTGGGCGTGGCGGTGCTGATCTTCACCAACCTGATTCTGCTGCCGGTGCTGCTCTCCTACGTGGGCCTC‑G‑GCCTCTTCGGCGCGCAGGCTGCGCCGCGCCGCACGGGCACTGACGCCCACGTA < 1:153337/150‑1 ATCCAGGACCTGGCCGTTATCGCCAGCCTGGGCGTGGCGGTGCTGATCTTCACCAACCTGATTCTGCTGCCGGTGCTGCTCTCCTACGTGGGCCTC‑G‑GCCTCTTCGGCGCGCAGGCTGCGCCGCGCCGCACGGGCACTGACGCCCACGTA < 1:1596125/150‑1 TTCACCAACCTGATTCTGCTGCCGGTGCTGCTCTCCTACGTGGGCCTC‑G‑GCCTCTTCGGCGCGCAGGCTGCGCCGCGCCGCACGGGCACTGACGCCCAC > 1:1621999/1‑99 TTCACCAACCTGATTCTGCTGCCGGTGCTGCTCTCCTACGTGGGCCTC‑G‑GCCTCTTCGGCGCGCAGGCTGCGCCGCGCCGCACGGGCACTGACGCCCAC < 2:1621999/99‑1 GGCCTC‑G‑GCCTCTTCGGCGCGCAGGCTGCGCCGCGCCGCACGGGCACTGACGCCCACGTAGGAGAGCAGCACCGGCAGCAGAATCAGGTTGGTGAAGATCAGCACCGCCACGCCCAGGCTGGCGATAACGGCCAGGTCCTGGATCACCTG > 2:1408111/1‑150 CCGCGCTGCTCTGTGATGCGGTCGGTTTTGCCGTGCTCATGATCATTCAGATACAGGTGATCCAGGACCTGGCCGTTATCGCCAGCCTGGGCGTGGCGGTGCTGATCTTCACCAACCTGATTCTGCTGCCGGTGCTGCTCTCCTACGTGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3634673‑3634824 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcCTC‑G‑GCCTCTTCGGCGCGCAGGCTGCGCCGCGCCGCACGGGCACTGACGCCCACGTAGGAGAGCAGCACCGGCAGCAGAATCAGGTTGGTGAAGATCAGCACCGCCACGCCCAGGCTGGCGATAACGGCCAGGTCCTGGATCACCTG < NC_002947/3634872‑3634726 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |