New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3850748 =	77 (1.030)	4 (0.060)	4/244	NT	5.1%	coding (186/474 nt)	PP_3398	curli fiber surface‑exposed nucleator CsgB
	?	NC_002947	3850804 =	75 (1.050)					coding (242/474 nt)	PP_3398	curli fiber surface‑exposed nucleator CsgB

TGGGCACCGCCGGACTGGACGATACGGCCCAGAAGGGCCTGACCGTTCTGGTCGAGGGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3850810‑3850748 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgGTGCCCAGGAAGCGTACATCTTGCAGGAAGGCAGTGACCTGATGGCCATCATCAGCCAACAGGGAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCC  >  NC_002947/3850804‑3850949                                                                                                                                                                                                                   TGGGCACCGCCGGACTGGACGATACGGCCCAGAAGGGCCTGACCGTTCTGGTCGAGGGCGGCGGTGCCCAGGAAGCGTACATCTTGCAGGAAGGCAGTGACCTGATGGCCATCATCAGCCAACAGGGAAATGGCAACAGTGCGT                                                                   >  1:775398/1‑144 TGGGCACCGCCGGACTGGACGATACGGCCCAGAAGGGCCTGACCGTTCTGGTCGAGGGCGGCGGTGCCCAGGAAGCGTACATCTTGCAGGAAGGCAGTGACCTGATGGCCATCATCAGCCAACAGGGAAATGGCAACAGTGCGT                                                                   <  2:775398/144‑1        CGCCGGACTGGACGATACGGCCCAGAAGGGCCTGACCGTTCTGGTCGAGGGCGGCGGTGCCCAGGAAGCGTACATCTTGCAGGAAGGCAGTGACCTGATGGCCATCATCAGCCAACAGGGAAATGGC                                                                             >  1:299484/1‑127        CGCCGGACTGGACGATACGGCCCAGAAGGGCCTGACCGTTCTGGTCGAGGGCGGCGGTGCCCAGGAAGCGTACATCTTGCAGGAAGGCAGTGACCTGATGGCCATCATCAGCCAACAGGGAAATGGC                                                                             <  2:299484/127‑1                                                            GGCGGTGCCCAGGAAGCGTACATCTTGCAGGAAGGCAGTGACCTGATGGCCATCATCAGCCAACAGGGAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCC  <  1:1479676/150‑1                                                                                                                                                                                                                   TGGGCACCGCCGGACTGGACGATACGGCCCAGAAGGGCCTGACCGTTCTGGTCGAGGGCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3850810‑3850748 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgGTGCCCAGGAAGCGTACATCTTGCAGGAAGGCAGTGACCTGATGGCCATCATCAGCCAACAGGGAAATGGCAACAGTGCGTCGATTCGCCAGAGCGGCAGCAGCAACAACGCCGCCATCGAGCAGATCGGCAACGACAACAGCGCC  >  NC_002947/3850804‑3850949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.