New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4075786	NA (NA)	56 (0.790)	45/240	NT	96.7%	intergenic (‑328/+113)	PP_3586/tpx	transposase/2‑Cys peroxiredoxin
	?	NC_002947	= 4957611	2 (0.030)					intergenic (‑49/+114)	fliH/fliG	flagellar assembly protein FliH/flagellar motor switch protein

CGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATctcctac‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4075638‑4075786 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGGAGCCCGAA  <  NC_002947/4957611‑4957458                                                                                                                                                                                                                                                                                                                 CGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATC                                                                                                                                                           >  2:1375688/1‑150 CGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATC                                                                                                                                                           >  2:660548/1‑150 CGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGAGAACCGCCTTTTCTTTTTCAAAATGTTAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATC                                                                                                                                                           <  1:116747/150‑1 CGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGACCACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATC                                                                                                                                                           <  1:1858588/150‑1   CGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTC                                                                                                                                                         <  2:1598049/150‑1   CGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTC                                                                                                                                                         <  2:672899/150‑1    GCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCC                                                                                                                                                        >  1:260758/1‑150      ACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTTTTTTTTTCAGCGTCGCTGGGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTA                                                                                                                                                      >  2:3402/1‑150      ACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTA                                                                                                                                                      >  1:188505/1‑150      ACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTA                                                                                                                                                      <  1:374708/150‑1      ACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTA                                                                                                                                                      >  1:296189/1‑150      ACACGAACCCTAACAAAGAAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCCCATGTTTGCTGCGCGACACCGCAGCCCGGCAGGGCTGGGTAATCTGCTA                                                                                                                                                      >  2:584894/1‑150       CACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTAC                                                                                                                                                     >  1:768621/1‑150       CACGAACCCTAACAAAGCAAAAGGCGGCTAGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTAC                                                                                                                                                     >  1:1297348/1‑150        ACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATGTCCTACA                                                                                                                                                    >  1:29670/1‑150        ACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACA                                                                                                                                                    >  2:552732/1‑150        ACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACA                                                                                                                                                    >  2:1140459/1‑150        ACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACA                                                                                                                                                    >  2:443283/1‑150        ACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACA                                                                                                                                                    <  1:1523051/150‑1        ACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACA                                                                                                                                                    >  2:1459983/1‑150        ACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACA                                                                                                                                                    >  1:1194681/1‑150        ACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACA                                                                                                                                                    >  2:215412/1‑150        ACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTC                                                                                                                                                         <  1:1887185/145‑1        ACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTC                                                                                                                                                         >  2:1887185/1‑145          GAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAG                                                                                                                                                  <  1:1395832/150‑1          GAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAG                                                                                                                                                  <  1:564368/150‑1             CCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGA                                                                                                                                               <  1:754168/150‑1             CCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGA                                                                                                                                               <  1:1173388/150‑1                  ACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTATAGCGGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTG                                                                                                                                          >  2:1401741/1‑150                    AAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGACGCCGTACACCTCGTGTTTTCCTCGCGGCGGCGCAGCCCGGGAGGGCTGGGTGATCTCCTACAAGGGACCGTGTC                                                                                                                                        >  2:213647/1‑150                    AAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTC                                                                                                                                        <  2:395707/150‑1                    AAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTC                                                                                                                                        <  1:1339671/150‑1                     AAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGAGCGACAGCGCAGCCCGAAAGGGCTTGTGGAGCTCCTACAAGGGACAGTGTCG                                                                                                                                       >  2:310939/1‑150                      AGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGG                                                                                                                                      <  1:139592/150‑1                             GGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACA                                                                                                                               <  1:337188/150‑1                                GGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGATGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGG                                                                                                                            >  1:904349/1‑150                                     GCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGA                                                                                                                       >  1:566212/1‑150                                        CTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAA                                                                                                                    <  2:566212/150‑1                                              GGCCAACCGCCGTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAACCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGTGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGAC                                                                                                              <  2:1003470/150‑1                                                CCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTT                                                                                                                          <  2:132951/136‑1                                                CCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTT                                                                                                                          >  1:132951/1‑136                                                CCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGAC                                                                                                                                              >  1:167608/1‑116                                                CCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGAC                                                                                                                                              <  2:167608/116‑1                                                  AACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCA                                                                                                          >  2:863278/1‑150                                                   ACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCAT                                                                                                         <  2:679322/150‑1                                                     CGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGC                                                                                                       >  2:172626/1‑150                                                            TCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGCCCGTGTCGGCCGAACATGGCTTGAGAACATGGCAGCATGCCCACCAA                                                                                                >  2:430608/1‑150                                                             CTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAA                                                                                               <  1:310939/150‑1                                                                TTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAA                                                                                            <  2:702453/150‑1                                                                 TTCAAAATGTCAGCGTCGGTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAAC                                                                                           >  2:1169343/1‑150                                                                 TTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAAC                                                                                           >  2:1166307/1‑150                                                                      AATGTCAGCGTCGCTGCGGAACTGACGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCAC                                                                                      <  1:863278/150‑1                                                                               GTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGTATGCCCACCAAAGAACACCACCCCAGCGAC                                                                             <  2:1116408/150‑1                                                                                        GAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAA                                                                                                                                 <  1:837475/89‑1                                                                                        GAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAA                                                                                                                                 >  2:837475/1‑89                                                                                            tgtAGCTGTACACCTCATGATTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCC                                                                >  2:762393/4‑150                                                                                            TGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCC                                                                >  1:178347/1‑150                                                                                             GAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCG                                                               >  2:1425725/1‑150                                                                                                GCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGCTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGA                                                            >  2:1491648/1‑150                                                                                                 CCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGcc                                                           >  1:1287731/1‑148                                                                                                      CACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGGTCTCCTACAAGGGACCGTGTCCGCCCAACATCGTTTGAGAACACGACAAAATTCTCAGCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGA                                                      <  1:1078334/150‑1                                                                                                       gttTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAG                                                     <  2:1287731/147‑1                                                                                                         CTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAG                                                     >  1:1680051/1‑148                                                                                                         CTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAA                                                                                               >  2:1363559/1‑106                                                                                                         CTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAA                                                                                               <  1:1363559/106‑1                                                                                                         CTCATGTTTGCTGCGCGACAGCGAAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAG                                                     <  2:1680051/148‑1                                                                                                            ATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGT                                                >  2:717499/1‑150                                                                                                            ATGTGTGCTGCGCGACAGCGCAGCCGGGAAGGGCTGGGTGATCTGCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGT                                                <  2:1835972/150‑1                                                                                                               TTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGC                                                                                                       <  2:1242810/92‑1                                                                                                               TTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGC                                                                                                       >  1:1242810/1‑92                                                                                                                   CTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTG                                         >  1:260947/1‑150                                                                                                                    TGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGT                                        >  2:764787/1‑150                                                                                                                    TGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCC                                                                      <  2:696029/120‑1                                                                                                                    TGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCC                                                                      >  1:696029/1‑120                                                                                                                    TGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGGTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGT                                        >  2:1383309/1‑150                                                                                                                       GCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGA                                     <  1:172626/150‑1                                                                                                                                  GCCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGC                          <  2:260947/150‑1                                                                                                                                   CCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGT                                                <  2:663662/127‑1                                                                                                                                   CCCGGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGT                                                >  1:663662/1‑127                                                                                                                                     CGGAAGGGCTGGGTGCTCTCCTACCAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCGCCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTC                       <  1:124148/150‑1                                                                                                                                      GGAAGGGCTGGGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCG                      >  1:146547/1‑150                                                                                                                                                GGTGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACC            >  1:92355/1‑150                                                                                                                                                  TGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGG          >  1:683296/1‑150                                                                                                                                                  TGATCTCCTACAAGGGACCGTGTCGGCCGAACATGGGTTGAGAACATGACAGCATGCCCACCAAAGAACACTACCCTCGGGGCCTTATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGG          >  2:454599/1‑150                                                                                                                                                   GATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGGA         <  1:1900088/150‑1                                                                                                                                                   GATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGGA         <  1:685500/150‑1                                                                                                                                                   GATCTCCTACAAGCGACCGTGTCGGCCGAACATGGTTTGAGACCATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGGA         <  2:1807431/150‑1                                                                                                                                                    ATCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGGAG        >  1:1350914/1‑150                                                                                                                                                     TCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGGAGC       <  2:667683/150‑1                                                                                                                                                     TCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGGAGC       >  2:803610/1‑150                                                                                                                                                     TCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGAC                                                                             >  1:1472781/1‑80                                                                                                                                                     TCTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGAC                                                                             <  2:1472781/80‑1                                                                                                                                                      CTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGGAGCC      >  1:511325/1‑150                                                                                                                                                         CTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGGAGCCCGc   >  2:632633/1‑149                                                                                                                                                          TACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGGAGCCCGAA  >  2:1010855/1‑150                                                                                                                                                          TACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAAAACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGACAAGCTTCGACCCGGAACCGGAGCCCGAA  >  1:795009/1‑150                                                                                                                                                                                                                                                                                                                 CGCGCACACGAACCCTAACAAAGCAAAAGGCGGCTGGCCCTACCGGGCCAACCGCCTTTTCTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCATGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTGGGTGATctcctac‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4075638‑4075786 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCCTACAAGGGACCGTGTCGGCCGAACATGGTTTGAGAACATGACAGCATGCCCACCAAAGAACACCACCCCAGCGACCTGATCCGTGCCCGCGACCTCGAGGGCGTGGATGTGTGGACGCTGCCAAGCTTCGACCCGGAACCGGAGCCCGAA  <  NC_002947/4957611‑4957458

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.