| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4923020 | 76 (1.020) | 4 (0.060) | 4/242 | NT | 5.3% | coding (283/480 nt) | PP_4332 | chemotaxis protein CheW |
| ? | NC_002947 | = 4923029 | 71 (1.000) | coding (274/480 nt) | PP_4332 | chemotaxis protein CheW | |||||
TTGTCCAGTTCGACCAGGATCAGCAGTTCGCCATTCTTGTTGCACACGCCTTGAATGAACTTGGCCGACTCTTCGTTACCCACGTTCGGCGCGGTTTCGATTTCGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4922866‑4923020‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgacAAGCAAGTGGTCGGCATTCTGGTCGACAGCGTGGCCGAAGTGGTTTACCTGCGCCAGTCCGAAATCGAAACCGCGCCGAACGTGGGTAACGAAGAGTCGGCCAAGTTCATTCAAGGCGTGTGCAACAAGAATGGCGAACTGCTGATC < NC_002947/4923029‑4922883 aTGTCCAGTTCGACCAGGATCAGCAGTTCGCCATTCTTGTTGCACACGCCTTGAATGAACTTGGCCGACTCTTCGTTACCCACGTTCGGCGCGGTTTCGATTTCGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATG > 2:1422311/2‑150 GTCCAGTTCGACCAGGATCAGCAGTTCGCCATTATTGTTGCACACGCCTTGAATGAACTTGGCCGACTCTTCGTTACCCACGTTCGGCGCGGTTTCGATTTCGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCC < 2:150780/150‑1 CAGTTCGCCCAGGATCAGCAGTTCGCCATTCTTGTTGCACACGCCTTGAAGGAACTTGGCCGACTCTTCGTTACCCACGTTCGGCGCGGTGTCGATTTCGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCCGAC < 1:209753/150‑1 CAGTTCGACCAGGATCAGCAGTTCGCCATTCTTGTTGCACACGCCTTGAATGAACTTGGCCGACTCTTCGTTACCCTCGTTCGGCGCGGTTTCGATTTCGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCCGAC < 1:127878/150‑1 TGTTGCACACGCCTTGAATGAACTTGGCCGACTCTTCGTTACCCACGTTCGGCGCGGTTTCGATTTCGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCCG > 1:1070332/1‑116 TGTTGCACACGCCTTGAATGAACTTGGCCGACTCTTCGTTACCCACGTTCGGCGCGGTTTCGATTTCGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCCG < 2:1070332/116‑1 GAATGAACTTGGCCGACTCTTCGTTACCCACGTTCGGCGCGGTTTCGATTTCGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCC > 1:1194634/1‑100 GAATGAACTTGGCCGACTCTTCGTTACCCACGTTCGGCGCGGTTTCGATTTCGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCC < 2:1194634/100‑1 TCGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCCGACAAGCAAGTGGTCGGCATTCTGGTC > 1:734018/1‑77 TCGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCCGACAAGCAAGTGGTCGGCATTCTGGTC < 2:734018/77‑1 CGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCCGA > 2:1163258/1‑51 CGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCCGA < 1:1163258/51‑1 GGACTGGCGCAGGTAAACCACTCCGGCCACGCTGTCGACCAGAATGCCGACAAGCAAGTGGTCGGCA > 2:1046658/1‑67 GGACTGGCGCAGGTAAACCACTCCGGCCACGCTGTCGACCAGAATGCCGACAAGCAAGTGGTCGGCA < 1:1046658/67‑1 CCGACACGCATTTGGTCGGCATTCTGGTCGACAGCGTGGCCGAAGTGGTTTACCTGCGCCAGTCCGAAATCGAAACCGCGCCGAACGTGGGTAACGAAGAGTCGGCCAAGTTCATTCAAGGCGTGTGCAACAAGAATGGCGAACTGCTGA < 1:1514548/150‑1 CCGACAAGCAAGTGGTCGGCATTCTGGTCGACAGCGTGGCCGAAGTGGTTTACCTGCGCCAGTCCGAAATCGAAACCGCGCCGAACGTGGGTAACGAAGAGTCGGCCAAGTTCATTCAAGGCGTGTGCAACAAGAATGGCGAACTGCTGA > 1:1706956/1‑150 CGACAAGCAAGTGGTCGGCATTCTGGTCGACAGCGTGGCCGAAGTGGTTTACCTGCGCCAGTCCGAAATCGAAACCGCGCCGAACGTGGGTAACGAAGAGTCGGCCAAGTTCATTCAAGGCGTGTGCAACAAGAATGGCGAACTGCTGAT > 1:187857/1‑150 GACAAGCAAGTGGTCGGCATTCTGGTCGACAGCGTGGCCGAAGTGGTTTACCTGCGCCAGTCCGAAATCGAAACCGCGCCGAACGTGGGTAACGAAGAGTCGGCCAAGTTCATTAAAGGCGTGTGCAACAAGAATGGCGAACTGCTGATC > 1:1762151/1‑150 TTGTCCAGTTCGACCAGGATCAGCAGTTCGCCATTCTTGTTGCACACGCCTTGAATGAACTTGGCCGACTCTTCGTTACCCACGTTCGGCGCGGTTTCGATTTCGGACTGGCGCAGGTAAACCACTTCGGCCACGCTGTCGACCAGAATGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4922866‑4923020‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgacAAGCAAGTGGTCGGCATTCTGGTCGACAGCGTGGCCGAAGTGGTTTACCTGCGCCAGTCCGAAATCGAAACCGCGCCGAACGTGGGTAACGAAGAGTCGGCCAAGTTCATTCAAGGCGTGTGCAACAAGAATGGCGAACTGCTGATC < NC_002947/4923029‑4922883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |