| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5219047 | 9 (0.120) | 4 (0.060) | 4/242 | NT | 31.8% | intergenic (+147/‑102) | PP_4598/PP_4599 | membrane protein/transposase |
| ? | NC_002947 | = 5219103 | NA (NA) | intergenic (+203/‑46) | PP_4598/PP_4599 | membrane protein/transposase | |||||
AGCTGACGGTGGGTGGTTGCCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5218895‑5219047‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acacccTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCC < NC_002947/5219103‑5218955 AGCTGACGGTGGGTGGTTGCCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACA < 1:921624/150‑1AGCTGACGGTGGGTGGTTGCCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACA < 1:1521387/150‑1 TGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACC < 1:519829/126‑1 TGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACC > 2:519829/1‑126 CTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCTGGCGCAGGCTTGCTTCTATTGTCGCT > 1:1648003/1‑150 TTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACC > 1:1802367/1‑88 TTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACC < 2:1802367/88‑1 GAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTT < 2:1648003/150‑1 GAGAAATCACCCCTCCTCCTTTCAACACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGT > 2:67925/1‑92 GAGAAATCACCCCTCCTCCTTTCAACACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGT < 1:67925/92‑1 cagACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTC < 2:546943/147‑1 ACACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCA > 1:717233/1‑150 ACACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTAT < 1:1205926/54‑1 ACACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTAT > 2:1205926/1‑54 CACCCTGTCGCAGGCTAGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCGCTCCTCCTCCCTTCAA < 2:974175/150‑1 CACCCTGGCGCAGGCTTGCTTTCATCGTCGCTTGCTCGCGAAGCATTCCTTATCGGCGCTTGGGTGTTGACAGGAGGAGGGGTGTTTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAA < 2:1534473/150‑1 CACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAA < 2:1826184/150‑1 CACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAA < 2:1687209/150‑1 CACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAA < 1:820982/150‑1 CACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAA > 2:132081/1‑150 CACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAA > 1:1652488/1‑150 ACCCTGGCTCAGGCTTGCTTCGATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAACGAGGGGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAG > 2:1061158/1‑150 ACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCGTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGGACTGCGCGAACAGTCAGAAGGGAGTTATGGCCCTCCTCCTCCCTTCAgg > 2:981580/1‑148 ACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAG > 1:1063875/1‑150 ACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAA > 1:238764/1‑111 ACCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAA < 2:238764/111‑1 CCCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGT < 1:139302/150‑1 CCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTC > 1:979024/1‑150 CCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTC > 2:1208522/1‑150 CCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTC > 2:1718010/1‑150 CCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTC > 1:1598314/1‑150 CCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTC > 1:1265917/1‑150 CCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCC < 1:319211/141‑1 CCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCC > 2:319211/1‑141 CCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTGATGGCCCTCCTCCTCCCTTCAAGTC > 1:1240869/1‑150 CCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTATGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTC > 2:990511/1‑150 CCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGG < 2:362439/79‑1 CCTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGG > 1:362439/1‑79 CCTCGCGCATGCTTGCTTATATTGTCGCTTGCTCGCGAGGCACCCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGCGACTTCTCCTACGGGCTGTACTGCGCGGACAGCCAGAAGCGCGTTATGGCCCTCCTCCTACCTTCAAGTC > 2:811185/1‑150 CTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGTTAGGCATTCCTTATCGGCGCATGGGTGTTGAAAGGAGGAGGGATGATTTCTCCTACGGTCTGCACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCC < 1:304010/150‑1 CTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGGAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCC > 1:1196612/1‑150 CTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCC > 2:548895/1‑150 AGCTGACGGTGGGTGGTTGCCTGTTCTGGCCTCTTCGCGGGTAAACCCGCTTGTATGGTAGGACTTGAAGGGAGGAGGAGGGCCATAACTCGCTTCTGACTGTTCGCGCAGTACAGACCGTAGGAGAAATCACCCCTCCTCCTTTCAACACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5218895‑5219047‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acacccTGGCGCAGGCTTGCTTCTATTGTCGCTTGCTCGCGAGGCATTCCTTATCGGCGCTTGGGTGTTGAAAGGAGGAGGGGTGATTTCTCCTACGGTCTGTACTGCGCGAACAGTCAGAAGCGAGTTATGGCCCTCCTCCTCCCTTCAAGTCC < NC_002947/5219103‑5218955 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |