New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5857778	100 (1.340)	6 (0.080)	6/242	NT	5.9%	coding (271/1371 nt)	PP_5134	hypothetical protein
	?	NC_002947	= 5857797	95 (1.340)					coding (290/1371 nt)	PP_5134	hypothetical protein

TGGAAGGTGCACGGCTGTCGGTGGACGGTGAACCTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGCCCTGCTCGACTACCTTGAACGCCTGGAGCGCCCAGGCGAGCGCCTGGACGGCCCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5857641‑5857778 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccTGCAGAAAACGCTCCAGCCGGGCAGGGCCGTCCAGGCGCTCGCCTGGGCGCTCCAGGCGTTCAAGGTAGTCGAGCAGGGCGATGGCATCTTCCAGGCCGGGCGTGTCGTACAGCTCCAGCAAAGGTTCACCGTCCACCGACAGCCGTGC  <  NC_002947/5857797‑5857649                                                                                                                                                                                                                                                                                                 TGGAAGGTGCACGGCTGTCGGTGGACGGTGAACCTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGCCCTGCTCGACTACCTTGAACGCCTGGAGCGCCCAGGCGAGCGCCTGGACGGCGCTGCCCTGCAGAAAACGC                                                                                                                                           >  2:997963/1‑150                     GTGGACGGTGAACCTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGCCCTGCTCGACTACCTTGAACGCCTGGAGCGCCCAGGCGAGCGCCTGGACGGCGCTGCCCTGCAGAAAACGCTCCAGCCGGGCAGGGCCGTC                                                                                                                       <  1:997963/150‑1                                                                                      CGACTACCTTGAACGCCTGGAGCGCCCAGGCGAGCGCCTGGACGGCCCTGCCCTGCAGAAAACGCTCCAGCCGGGCAGGGCC                                                                                                                          <  1:703276/82‑1                                                                                      CGACTACCTTGAACGCCTGGAGCGCCCAGGCGAGCGCCTGGACGGCCCTGCCCTGCAGAAAACGCTCCAGCCGGGCAGGGCC                                                                                                                          >  2:703276/1‑82                                                                                               TGAACGCCTGGAGCGCCCAGGCGAGCGCCTGGACGGCCCTGCCCTGCAGAAAACGCTCCAGCCGGGCAGGGCCGT                                                                                                                        <  1:1668370/75‑1                                                                                               TGAACGCCTGGAGCGCCCAGGCGAGCGCCTGGACGGCCCTGCCCTGCAGAAAACGCTCCAGCCGGGCAGGGCCGT                                                                                                                        >  2:1668370/1‑75                                                                                                                                          CTGCAGAAAACGCTCCAGCCGGGCAGGGCCGTCCAGGCGCTCGCCTGGGCGCTCCAGGCGTTCAAGGTAGTCGAGCAGGGCGATGGCATCTTCCAGGCCGGGCGTGTCGTACAGCTCCAGCAAAGGTTCACCGTCCACCGACAGCCGTGC  >  2:1666378/1‑150                                                                                                                                          CTGCAGAAAACGCTCCAGCCGGGCAGGGCCGTCCAGGCGCTCGCCTGGGCGCTCCAGGCGTTCAAGGTAGTCGAGCAGGGCGATGGCATCTTCCAGGCCGGGCGTGTCGTACAGCTCCAGCAAAGGTTCACCGTCCACCGACAGCCGTGC  >  2:1666386/1‑150                                                                                                                                                                                                                                                                                                 TGGAAGGTGCACGGCTGTCGGTGGACGGTGAACCTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGCCCTGCTCGACTACCTTGAACGCCTGGAGCGCCCAGGCGAGCGCCTGGACGGCCCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5857641‑5857778 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccTGCAGAAAACGCTCCAGCCGGGCAGGGCCGTCCAGGCGCTCGCCTGGGCGCTCCAGGCGTTCAAGGTAGTCGAGCAGGGCGATGGCATCTTCCAGGCCGGGCGTGTCGTACAGCTCCAGCAAAGGTTCACCGTCCACCGACAGCCGTGC  <  NC_002947/5857797‑5857649

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.