New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 5857778100 (1.340)6 (0.080) 6/242 NT 5.9% coding (271/1371 nt) PP_5134 hypothetical protein
?NC_002947 = 5857797 95 (1.340)coding (290/1371 nt) PP_5134 hypothetical protein

Only 100 of 113 total aligned reads displayed.

GCACGGCTGTCGGTGGACGGTGAACCTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGAACTGGAAGTGCTGGCCAACTGCGGC  >  NC_002947/5857649‑5857945
                                                                                                                                                      |                                                                                                                                                    
gCACGGCTGTCGGTGGACGGTGAACCTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAg                                                                                                                                                     >  2:1666378‑M2/1‑149 (MQ=255)
      cTGTCGGTGGACGGTGAACCTTTGCTGGAGCTGTACGACACGCCCCGACCGCCCG‑CACAGGCGCGCCAGCCTTACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGc                                                                                                                                               <  1:224235/150‑1 (MQ=255)
         tCGGTGGACGGTGAACCTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGaa                                                                                                                                            <  1:604894/150‑1 (MQ=255)
           ggTGGACGGTGAACCTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAgc                                                                                                                                          <  1:1004286/150‑1 (MQ=255)
               gACGGTGAACCTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAgcgcgc                                                                                                                                      >  1:732428/1‑150 (MQ=255)
                  ggTGAACCTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCaa                                                                                                                                   >  2:985424/1‑150 (MQ=255)
                  ggTGAACCTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCaa                                                                                                                                   >  2:37988/1‑150 (MQ=255)
                        ccTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGAGCTAACGCTTc                                                                                                                             >  1:506205/1‑150 (MQ=255)
                          tttGCTGGAGCTGTAAGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGa                                                                                                                           >  2:1607936/1‑150 (MQ=255)
                             gCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCa                                                                                                                        <  2:693272/150‑1 (MQ=255)
                                ggAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGTGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCagga                                                                                                                     <  2:1127519/150‑1 (MQ=255)
                                       tACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAg                                                                                                              >  1:110685/1‑150 (MQ=255)
                                       tACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAg                                                                                                              >  1:322788/1‑150 (MQ=255)
                                       tACGACACGCCAGGCCTGGAAGATGCCATCGC‑CATGCTCGACTACCTTGAACGCCTGGAGCGC‑ACAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAg                                                                                                              >  2:161091/1‑150 (MQ=255)
                                         cGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGt                                                                                                            >  1:919511/1‑150 (MQ=255)
                                             acGCCAGGCCTGGAAGATGCCATCGC‑CATGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTg                                                                                                        <  1:161091/150‑1 (MQ=255)
                                               gCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTCCCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTgcg                                                                                                      <  1:677504/150‑1 (MQ=255)
                                               gCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCag                                                                                                                       <  2:1744133/133‑1 (MQ=255)
                                               gCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCag                                                                                                                       >  1:1744133/1‑133 (MQ=255)
                                                  cGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTgcg                                                                                                      <  1:910527/147‑1 (MQ=255)
                                                  cGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTgcg                                                                                                      >  2:910527/1‑147 (MQ=255)
                                                       tGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAActgc                                                                                              >  2:162587/1‑150 (MQ=255)
                                                           aGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGc                                                                                          <  2:607729/150‑1 (MQ=255)
                                                           aGATGCCATCGC‑CCTGCTCGACCCCCTCGAACGACTAGATCGG‑CCTGGCGGTCGCCTGGACGGCCCTGCCCCGTTATATCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGc                                                                                          <  1:889014/150‑1 (MQ=255)
                                                             aTGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGCGCAGCAATGCGCGACAACGTGTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCa                                                                                        <  1:37988/150‑1 (MQ=255)
                                                                ccATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTc                                                                                     >  1:537582/1‑150 (MQ=255)
                                                                ccATCGC‑CCTGCTCGACTACCTTGAACGCCAGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTc                                                                                     >  1:1799149/1‑150 (MQ=255)
                                                                 cATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCa                                                                                    <  1:1607936/150‑1 (MQ=255)
                                                                  aTCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCAt                                                                                   >  2:331736/1‑150 (MQ=255)
                                                                  aTCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTACTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCAt                                                                                   >  2:1314590/1‑150 (MQ=255)
                                                                   tCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATg                                                                                  >  1:532763/1‑150 (MQ=255)
                                                                     gC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAAATCGTGGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGcc                                                                                >  1:593484/1‑150 (MQ=255)
                                                                            cTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCaggag                                                                                                                    <  2:1571564/108‑1 (MQ=255)
                                                                            cTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCaggag                                                                                                                    >  1:1571564/1‑108 (MQ=255)
                                                                            cTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTg                                                                          >  2:273283/1‑150 (MQ=255)
                                                                            cTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTg                                                                          >  2:1619833/1‑150 (MQ=255)
                                                                             tCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGt                                                                         <  1:878139/150‑1 (MQ=255)
                                                                              cGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTa                                                                        <  1:584838/150‑1 (MQ=255)
                                                                               gACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTAt                                                                       <  1:1145931/150‑1 (MQ=255)
                                                                                aCTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTAtg                                                                      >  1:1189886/1‑150 (MQ=255)
                                                                                   cccTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGa                                                                   <  1:1053735/149‑1 (MQ=255)
                                                                                   aCCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGTTGGATTGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGa                                                                   <  1:1049714/150‑1 (MQ=255)
                                                                                    ccTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGAt                                                                  >  2:814211/1‑150 (MQ=255)
                                                                                    cattGAAAGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGAt                                                                  >  2:288026/3‑150 (MQ=255)
                                                                                     cTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATc                                                                 <  2:1795258/150‑1 (MQ=255)
                                                                                     cTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATc                                                                 <  2:919511/150‑1 (MQ=255)
                                                                                      ttGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCg                                                                >  1:908324/1‑150 (MQ=255)
                                                                                      ttGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGAGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCg                                                                >  2:630171/1‑150 (MQ=255)
                                                                                       tGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGa                                                               <  2:110685/150‑1 (MQ=255)
                                                                                        gAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGAt                                                              >  1:725245/1‑150 (MQ=255)
                                                                                        gAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGAt                                                              >  1:162818/1‑150 (MQ=255)
                                                                                          tcGCCTGG‑GCGCTCCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCag                                                                                                                       >  1:973904/2‑91 (MQ=255)
                                                                                          tcGCCTGG‑GCGCTCCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCag                                                                                                                       <  2:973904/90‑1 (MQ=255)
                                                                                          ccGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATgc                                                            <  1:1542822/149‑1 (MQ=255)
                                                                                          aCGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATgc                                                            >  2:1791083/1‑150 (MQ=255)
                                                                                              cTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGaa                                                                                                                                            >  2:535178/1‑66 (MQ=255)
                                                                                              cTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGaa                                                                                                                                            <  1:535178/66‑1 (MQ=255)
                                                                                                ggAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGa                                                      >  2:1423275/1‑150 (MQ=255)
                                                                                                    cgc‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGc                                                                                                                                               >  2:831739/1‑57 (MQ=255)
                                                                                                    cgc‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGc                                                                                                                                               <  1:831739/57‑1 (MQ=255)
                                                                                                      c‑ccAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCggg                                                >  2:125327/1‑149 (MQ=255)
                                                                                                       tccAGGCGCTCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGc                                                                                 <  2:638839/116‑1 (MQ=255)
                                                                                                        ccAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTg                                               >  1:609414/1‑150 (MQ=255)
                                                                                                        ccAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTg                                               >  2:1570686/1‑150 (MQ=255)
                                                                                                        ccAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTg                                               >  1:75563/1‑150 (MQ=255)
                                                                                                        ccAGGCGAGCGCCTGGACGGCCCTGCCCGGCTCGCGCGCTTTCTGCCGGGCAGCCAAGCGCGCCAACCCTTCGAGCAGGCGCCCAAGGTCTTGCGCCAACTCCTGGCCAGTCCTGCCCGCCTGTATGTGATCGCTCCCCCCGAGCCgccg                                               >  1:811176/1‑147 (MQ=255)
                                                                                                          aGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCt                                             >  2:578290/1‑150 (MQ=255)
                                                                                                           ggCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTg                                            <  1:1345642/150‑1 (MQ=255)
                                                                                                            gCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTgg                                           <  1:1318227/150‑1 (MQ=255)
                                                                                                                gcgcATGGACGGCCCTGCCCGGCTGGAGCGTTTTCCGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCaa                                       <  2:1027589/150‑1 (MQ=255)
                                                                                                                 cgcCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCACGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAg                                      <  1:1570686/150‑1 (MQ=255)
                                                                                                                  gcCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGt                                     >  1:1908232/1‑150 (MQ=255)
                                                                                                                    ctcaaCGGCCCCGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTAc                                   >  2:934014/5‑150 (MQ=255)
                                                                                                                     tGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGACGCGCGCCACCCCTTCGTGCAGGCGGCTGAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTAcc                                  <  1:1467416/150‑1 (MQ=255)
                                                                                                                     tGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGTTCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTCAGTGTGCGATGCGCGCGAGCCGGTGCTGGCCAAGTAcc                                  <  1:151553/150‑1 (MQ=255)
                                                                                                                       gACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAgggcagcgccgtccaggcgctcgcctgggcgctccaggcgttcaaggtagtcgagcagggcgatggcatcttccaggccgggcgtgtcgtacagctccagcaaaggttcaccgtccac                                <  1:997963‑M2/150‑119 (MQ=255)
                                                                                                                        aCGGCCCTGCCCGGCTGGAGCGTTTTCTGCAgggcagggccgtccaggcgctcgcctgggcgctccaggcgttca                                                                                                          <  1:1668370‑M2/75‑45 (MQ=255)
                                                                                                                        aCGGCCCTGCCCGGCTGGAGCGTTTTCTGCAgggcagggccgtccaggcgctcgcctgggcgctccaggcgttca                                                                                                          >  2:1668370‑M2/1‑31 (MQ=255)
                                                                                                                          ggCCCTGCCCGGCTGGAGCGTTTTCTGCAgggcagggccgtccaggcgctcgcctgggcgctccaggcgttcaaggtagtcg                                                                                                 <  1:703276‑M2/82‑54 (MQ=255)
                                                                                                                          ggCCCTGCCCGGCTGGAGCGTTTTCTGCAgggcagggccgtccaggcgctcgcctgggcgctccaggcgttcaaggtagtcg                                                                                                 >  2:703276‑M2/1‑29 (MQ=255)
                                                                                                                          ggCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGcgac                             >  1:1659086/1‑150 (MQ=255)
                                                                                                                          ggCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGcgac                             <  2:732428/150‑1 (MQ=255)
                                                                                                                            cccTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGcc                                                                                                    <  1:1710349/77‑1 (MQ=255)
                                                                                                                            cccTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGcc                                                                                                    >  2:1710349/1‑77 (MQ=255)
                                                                                                                             ccTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGaa                          >  2:498970/1‑150 (MQ=255)
                                                                                                                             ccTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGaa                          >  1:837659/1‑150 (MQ=255)
                                                                                                                             ccTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGaa                          >  1:1546656/1‑150 (MQ=255)
                                                                                                                             ccTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGaa                          >  1:168803/1‑150 (MQ=255)
                                                                                                                             ccTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGaa                          >  1:983755/1‑150 (MQ=255)
                                                                                                                                  ccGGCTGGAGCGTTTTCTGCAGGGCAGCGAAgcgc                                                                                                                                        <  2:1797995/35‑1 (MQ=255)
                                                                                                                                  ccGGCTGGAGCGTTTTCTGCAGGGCAGCGAAgcgc                                                                                                                                        >  1:1797995/1‑35 (MQ=255)
                                                                                                                                         gAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGAACTGGAAGTGCTg              >  1:1667267/1‑150 (MQ=255)
                                                                                                                                         gAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGAACTGGAAGTGCTg              <  1:934014/150‑1 (MQ=255)
                                                                                                                                              ttttCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGc                                                                                 >  1:1688405/1‑78 (MQ=255)
                                                                                                                                              ttttCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGc                                                                                 <  2:1688405/78‑1 (MQ=255)
                                                                                                                                               tttCTGCAGGGCAGCGGAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGAACTGGAAGTGCTGGCCAAc        <  2:411629/150‑1 (MQ=255)
                                                                                                                                                ttCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGAACTGGAAGTGCTGGCCAACt       >  2:738758/1‑150 (MQ=255)
                                                                                                                                                   tGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGAACTGGAAGTGCTGGCCAACTGCg    >  2:1037683/1‑150 (MQ=255)
                                                                                                                                                   tGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGAACTGGAAGTGCTGGCCAACTGCg    <  2:75563/150‑1 (MQ=255)
                                                                                                                                                    gCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGAACTGGAAGTGCTGGCCAACTGCgg   <  1:206739/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                    
GCACGGCTGTCGGTGGACGGTGAACCTTTGCTGGAGCTGTACGACACGCCCGGCCTGGAAGATGCCATCGC‑CCTGCTCGACTACCTTGAACGCCTGGAGCGC‑CCAGGCGAGCGCCTGGACGGCCCTGCCCGGCTGGAGCGTTTTCTGCAGGGCAGCGAAGCGCGCCAACGCTTCGAGCAGGAGGCCAAGGTATTGCGCCAACTGCTGGCCAGTCATGCCGGCCTGTATGTGATCGATGCGCGCGAGCCGGTGCTGGCCAAGTACCGCGACGAACTGGAAGTGCTGGCCAACTGCGGC  >  NC_002947/5857649‑5857945

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.