New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5947618	79 (1.060)	4 (0.060)	4/246	NT	5.4%	coding (912/1260 nt)	rho	transcription termination factor Rho
	?	NC_002947	= 5947657	64 (0.890)					coding (873/1260 nt)	rho	transcription termination factor Rho

AACACACGCTTCTCAGCGATGCGGCGGTCCAGCGGCAGCTCCATGTTGCCGGTACCCTTGAACTCTTCGTAGATCACTTCGTCCATCTTCGAGCCGGTTTCAACCAGCGCAGTGGCGATAATGGTCAGCGAACCGCCTTCCTCGATGTTACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5947466‑5947618 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcCCACGCCCTCGAGAAGCCCAAGCGCTTCTTCGGTGCTGCGCGTAACATCGA  <  NC_002947/5947657‑5947607                                                                                                                                                                                                              AACACACGCTTCTCAGCGATGCGGCGGTCCAGCGGCAGCTCCATGTTGCCGGTACCCTTGAACTCTTCGTAGATCACTTCGTCCATCTTCGAGCCGGTTTCAACCAGCGCAGTGGCGATAATGGTCAGCGAACCGCCTTCCTCGATGTTA                                                        <  2:1045681/150‑1    ACACGCTTCTCAGCGATGCGGCGGTCCAGCGGCAGCTCCATGTTGCCGGTACCCTTGAACTCTTCGTAGATCACTTCGTCCATCTTCGAGCCGGTTTCAACCAGCGCAGTGGCGATAATGGTCAGCGAACCGCCTTCCTCGATGTTACGC                                                     >  2:1251832/1‑150    ACACGCTTCTCAGCGATGCGGCGGTCCAGCGGCAGCTCCATGTTGCCGGTACCCTTGAACTCTTCGTAGATCACTTCGTCCATCTTCGAGCCGGTTTCAACCAGCGCAGTGGCGATAATGGTCAGCGAACCGCCTTCCTCGATGTTACGC                                                     >  2:999217/1‑150    ACACGCTTCTCAGCGATGCGGCGGTCCAGCGGCAGCTCCATGTTGCCGGTACCCTTCAACTCTTCGTAGATCACTTCGTCCATCTTCGAGCCGGTTTCAGCCAGCGCAGTGGCGATAATGGTCAGCGAACCGCCTTCCTCGATGTTACGC                                                     >  2:999191/1‑150                         CGGTCCAGCGGCAGCTCCATGTTGCCGGTACCCTTGAACTCTTCGTAGATCACTTCGTCCATCTTCGAGCCGGTTTCAACCAGCGCAGTGGCGATAATGGTCAGCGAACCGCCTTCCTCGATGTTACGCCCACGCCCTCGAGAAGCCCAA                                >  2:478634/1‑150                                                 CCGGTACCCTTGAACTCTTCGTAGATCACTTCGTCCATCTTCGAGCCGGTTTCAACCAGCGCAGTGGCGATAATGGTCAGCGAACCGCCTTCCTCGATGTTACGCCCACGCCCTCGAGAAGCCCAAGCGCTTCTTCGGTGCTGCGCGTAA        <  2:1470082/150‑1                                                   GGTACCCTTGAACTCTTCGTAGCTCAATTCGTCCATCTTCGAGCCGGTTTCAACCAGCGCAGTGGCGATAATGGTCAGCGAACCGCCTTCCTCGATGTTACGCCCACGCCCTCGAGAAGCCCAAGCGCTTCTTCGGTGCTGCGCGTAACA      <  1:478634/150‑1                                                       ccctgtAACGCTTCGTAGATCACTTCGTCCATCTTCGAGCCGGTTTCAACCAGCGCAGTGGCGATAATGGTCAGCGAACCGCCTTCCTCGATGTTACGCCCACGCCCTCGAGAAGCCCAAGCGCTTCTTCGGTGCTGCGCGTAACATCGA  <  2:572642/144‑1                                                                                                                                                                                                              AACACACGCTTCTCAGCGATGCGGCGGTCCAGCGGCAGCTCCATGTTGCCGGTACCCTTGAACTCTTCGTAGATCACTTCGTCCATCTTCGAGCCGGTTTCAACCAGCGCAGTGGCGATAATGGTCAGCGAACCGCCTTCCTCGATGTTACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5947466‑5947618 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcCCACGCCCTCGAGAAGCCCAAGCGCTTCTTCGGTGCTGCGCGTAACATCGA  <  NC_002947/5947657‑5947607

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.