New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6006630	23 (0.310)	20 (0.370)	15/182	NT	52.3%	intergenic (+42/+57)	ydcJ/PP_5261	metalloprotein/LysR family transcriptional regulator
	?	NC_002947	= 6006642	20 (0.370)					intergenic (+54/+45)	ydcJ/PP_5261	metalloprotein/LysR family transcriptional regulator

CCGAATACGGCAGCAACGCCAACCGCGAAGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6006446‑6006630 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggcctcttcgcgggctcgcccgctcccacaggtCGTATGCCCT‑GTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTACAGATTTACATCGAACCCAGGTTCAACGCCTGTGCACAGGCCTGCAGCGACCGGCGCTCGCTTTGCGCATACAGCGCCAGCTCATCCTGTACCTGCA  <  NC_002947/6006642‑6006497                                                                                                                                                                                                                                                                                                                                              CCGAATACGGCAGCAACGCCAACCGCGAAGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTA                                                                                                                                                                                        >  1:1669667/1‑150  CGAATACGGCAGCAACGCCAACCGCGAAGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGCAC                                                                                                                                                                                       <  1:1780462/150‑1   gttcagGGCTGCAAGGCCAACCGCGGAGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACC                                                                                                                                                                                      <  2:1542273/144‑1   GAATACGGCAGCAACGCCAACCGCGAAGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACC                                                                                                                                                                                      >  1:1386263/1‑150                ACGCCAACCGCGAAGCGTTTGAAGCGCCGCGGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGG                                                                                                                                                                         <  2:713135/150‑1                ACGCCAACCGCGAAGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGG                                                                                                                                                                         <  2:812369/150‑1                ACGCCAACCGCGAAGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGG                                                                                                                                                                         <  1:354465/150‑1                    CAACCGCGAAGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTC                                                                                                                                                                     >  2:1450045/1‑150                     AACCGCGAAGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCG                                                                                                                                                                    >  2:668405/1‑150                       CCGCGAAGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCC                                                                                                                                                                  <  1:646822/150‑1                            AAGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTC                                                                                                                                                             <  2:1322918/150‑1                             AGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCC                                                                                                                                                            <  2:824706/150‑1                              GCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCGAGCCCGCgaag                                                                                                                                                           >  2:307333/1‑146                               CGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTTGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCc                                                                                                                                                          <  1:372475/150‑2                               CGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCA                                                                                                                                                          <  1:369381/150‑1                                 TTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACA                                                                                                                                                        >  1:90817/1‑150                                  TCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAG                                                                                                                                                       <  1:668405/150‑1                                                 GGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTA                                                                                                                                       >  2:1487319/1‑150                                                      CAGGTACAGGATGGGGTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTGGAACGTGGGTTCGATGTAAATCTGTACCGGCCTTTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGT                                                                                                                                  <  2:61646/150‑1                                                       AGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTG                                                                                                                                 <  1:916597/150‑1                                                        GGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGG                                                                                                                                <  2:1669667/150‑1                                                        GGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGG                                                                                                                                <  1:1487319/150‑1                                                        GGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGG                                                                                                                                <  1:1284250/150‑1                                                         GTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCG                                                                                                                                                                          >  1:1250401/1‑108                                                         GTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCG                                                                                                                                                                          <  2:1250401/108‑1                                                          TACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGA                                                                                                                              <  1:460124/150‑1                                                            CAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGAGC                                                                                                                            <  2:1386263/150‑1                                                             AGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGA                                                                                                                              <  1:280000/147‑1                                                             AGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGA                                                                                                                              >  2:280000/1‑147                                                               GATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGA                                                                                                                              <  2:1654292/145‑1                                                               GATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGA                                                                                                                              >  1:1654292/1‑145                                                                                               CCGGTCGCTGCAGGCCTGTGCACGGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGAGCGG                                                                                                                          <  2:843181/117‑1                                                                                               CCGGTCGCTGCAGGCCTGTGCACGGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGAGCGG                                                                                                                          >  1:843181/1‑117                                                                                                              CTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGG                                                                                                                                >  1:1713509/1‑96                                                                                                              CTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGG                                                                                                                                <  2:1713509/96‑1                                                                                                              CTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCAC                                                                                                                                                         >  2:1300966/1‑72                                                                                                              CTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCAC                                                                                                                                                         <  1:1300966/72‑1                                                                                                                      AGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGG                                                                                                                                >  1:631028/1‑88                                                                                                                      AGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGG                                                                                                                                <  2:631028/88‑1                                                                                                                           TTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTC                                                                                                                                                             >  1:1106006/1‑55                                                                                                                           TTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTC                                                                                                                                                             <  2:1106006/55‑1                                                                                                                                      TTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGAGC                                                                                                                            <  1:551117/76‑1                                                                                                                                      TTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGAGC                                                                                                                            >  2:551117/1‑76                                                                                                                                                          GCCTCTTCGCGGGCTCGCCCGCTCCCACAGGT‑ACAGGGCATACGACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTACAGATTTACATCGAACCCAGGTTCAACGCCTGTGCACAGGCCTGCAGCGACCGGCGCTCGCTTTGCGCA                              >  1:1536814/1‑150                                                                                                                                                                  GCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTACAGATTTACATCGAACCCAGGTTCAACGCCTGTGCACAGGCCTG                                                       <  2:1302501/117‑1                                                                                                                                                                  GCGGGCTCGCCCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTACAGATTTACATCGAACCCAGGTTCAACGCCTGTGCACAGGCCTG                                                       >  1:1302501/1‑117                                                                                                                                                                  GCGGGCTCGCCCGCTCCCACAGGTACAGGGCATA‑CGACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTACAGATTTACATCGAACCCAGGTTCAACGCCTGTGCACAGGCCTGCAGCGACCGGCGCTCGCTTTGCGCATACAGCGC                      <  2:1536814/150‑1                                                                                                                                                                            CCGNTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTACAGATTTACATCGAACCCAGGTTCCACGCCTGTGCACAGGCCTGCAGCGACCGGCGCTCGCTTTGCGCATACAGCCCCAGCTCATCC            >  2:1189839/1‑150                                                                                                                                                                            CCGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTACAGATTTACATCGAACCCAGGTTCAACGCCTGTGCACAGGCCTGCAGCGACCGGCGCTCGCTTTGCGCATACAGCGCCAGCTCATCC            >  1:198552/1‑150                                                                                                                                                                             CGCTCCCACAGGTCGTATGCCCT‑GTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTACAGATTTACATCGAACCCAGGTTCAACGCCTGTGCACAGGCCTGCAGCGACCGGCGCTCGCTTTGCGCATACAGCGCCAGCTCATCCT           >  1:726991/1‑150                                                                                                                                                                                  CCACAGGTCGTATGCCCT‑GTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTACAGATTTACATCGAACCCAGGTTCAACGCCTGTGCACAGGCCTGCAGCGACCGGCGCTCGCTTTGCGCATACAGCGCCAGCTCATCCTGTACC      >  1:1752652/1‑150                                                                                                                                                                                  CCACAGGTCGTATGCCCT‑GTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCG                                                                                                      <  2:1718942/54‑1                                                                                                                                                                                  CCACAGGTCGTATGCCCT‑GTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCG                                                                                                      >  1:1718942/1‑54                                                                                                                                                                                   CACAGGTCGTATGCCCT‑GTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTACAGATTTACATCGAACCCAGGTTCAACGCCTGTGCACAGGCCTGCAGCGACCGGCGCTCGCTTTGCGCATACAGCGCCAGCTCATCCTGTACCT     >  1:1460239/1‑150                                                                                                                                                                                      AGGTCGTATGCCCT‑GTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTACAGATTTACATCGAACCCAGGTTCAACGCCTGTGCACAGGCCTGCAGCGACCGGCGCTCGCTTTGCGCATACAGCGCCAGCTCATCCTGTACCTGCA  >  1:1705569/1‑150                                                                                                                                                                                                                                                                                                                                              CCGAATACGGCAGCAACGCCAACCGCGAAGCGTTCGAAGCGGCGCTGGGGTTGCAGGTACAGGATGAGCTGGCGCTGTATGCGCAAAGCGAGCGCCGGTCGCTGCAGGCCTGTGCACAGGCGTTGAACCTGGGTTCGATGTAAATCTGTACCGGCCTCTTCGCGGGCTCGCCCGCTCCCACAGGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6006446‑6006630 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑accggcctcttcgcgggctcgcccgctcccacaggtCGTATGCCCT‑GTACCTGTGGGAGCGGGCGAGCCCGCGAAGAGGCCGGTACAGATTTACATCGAACCCAGGTTCAACGCCTGTGCACAGGCCTGCAGCGACCGGCGCTCGCTTTGCGCATACAGCGCCAGCTCATCCTGTACCTGCA  <  NC_002947/6006642‑6006497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.