New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1583554	51 (0.680)	4 (0.060)	4/242	NT	6.6%	intergenic (+68/+50)	ttgR/PP_1388	HTH‑type transcriptional regulator TtgR/EmrB/QacA family drug resistance transporter
	?	NC_002947	= 1583575	64 (0.900)					intergenic (+89/+29)	ttgR/PP_1388	HTH‑type transcriptional regulator TtgR/EmrB/QacA family drug resistance transporter

GATCTGTTGGGTGATGTCGAAAAATGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCC  >  NC_002947/1583409‑1583703                                                                                                                                                  |                                                                                                                                                      gATCTGTTGGGTGATGTCGAAAAATGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAACGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCATGc                                                                                                                                                   <  2:1206382/150‑1 (MQ=255) gATCTGTTGGGTGATGTCGAAAAATGGGTCGACACCGGGCCGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGc                                                                                                                                                   >  2:31620/1‑150 (MQ=255)  aTCTGTTGGGTGATGTCGAAAAATGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCg                                                                                                                                                  <  1:1437120/150‑1 (MQ=255)                gTCGAAAAATGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGcac                                                                                                                                    >  1:268444/1‑150 (MQ=255)                  cGAAAAATGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACaa                                                                                                                                  <  1:1330458/150‑1 (MQ=255)                   gAAAAATGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAg                                                                                                                                 <  2:609506‑M2/150‑2 (MQ=255)                   gAAAAATGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAg                                                                                                                                 >  1:609506‑M2/1‑149 (MQ=255)                       aaTGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAggcgg                                                                                                                             >  1:1361107‑M2/1‑145 (MQ=255)                       aaTGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAggcgg                                                                                                                             >  2:1730820‑M2/1‑145 (MQ=255)                               gACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCttgtgctgcgaacagccgcagggcggccat                                                                                                                         >  2:1896928‑M1/1‑116 (MQ=255)                               gACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCttgtgctgcgaacagccgcagggcggccat                                                                                                                         <  1:1896928‑M1/146‑31 (MQ=255)                                acacCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCttgtgctgcgaacagccgcagggcggccatgccct                                                                                                                    >  2:1249875‑M1/1‑115 (MQ=255)                                acacCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAg                                                                                                                    <  2:1736042/150‑1 (MQ=255)                                   ccGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGa                                                                                                                 <  2:981668/150‑1 (MQ=255)                                     gggCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCttgtgctgcgaacagccgcagggcggccatgcccttaata                                                                                                               <  1:1249875‑M1/150‑41 (MQ=255)                                           gATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAg                                                                                                         >  1:1828190/1‑150 (MQ=255)                                                 ctgcGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCa                                                                                                   >  2:13072/1‑150 (MQ=255)                                                      cTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCgg                                                                                                                                                 >  1:1841442/1‑99 (MQ=255)                                                      cTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCgg                                                                                                                                                 <  2:1841442/99‑1 (MQ=255)                                                       ttGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGcc                                                                                             >  2:1308301/1‑150 (MQ=255)                                                       ttGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGcc                                                                                             >  2:161158/1‑150 (MQ=255)                                                                  tctGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGcc                                                                                  >  1:1449525/1‑150 (MQ=255)                                                                         aaaTGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCATGTTTGGTAAGGGGGCATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCGTCAGCGGCAGCGCAATTGTCGGTCggg                                                                           >  2:1006307/1‑150 (MQ=255)                                                                            tGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCaa                                                                        >  2:1042413/1‑150 (MQ=255)                                                                               cacTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGc                                                                     <  1:1042413/150‑1 (MQ=255)                                                                                acTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTCGCAGCCAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGcc                                                                    >  2:878885/1‑150 (MQ=255)                                                                                 cTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCa                                                                   <  1:1308301/150‑1 (MQ=255)                                                                                      ttAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGcc                                                              >  1:943820/1‑150 (MQ=255)                                                                                          ggATTGTGCCGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAAt                                                                                      <  1:98303/122‑1 (MQ=255)                                                                                          ggATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAAt                                                                                      >  2:98303/1‑122 (MQ=255)                                                                                          ggATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCaa                                                          <  1:737258/150‑1 (MQ=255)                                                                                           gATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAg                                                         >  1:1529233/1‑150 (MQ=255)                                                                                                tgAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTa                                                                                                          <  1:1629914/96‑1 (MQ=255)                                                                                                tgAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTa                                                                                                          >  2:1629914/1‑96 (MQ=255)                                                                                                 gAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCaa                                                                        >  1:1626819/1‑129 (MQ=255)                                                                                                 gAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCaa                                                                        <  2:1626819/129‑1 (MQ=255)                                                                                                 gAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTcc                                                   <  1:599134/150‑1 (MQ=255)                                                                                                       gtgtTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCAc                                             <  1:1648827/150‑1 (MQ=255)                                                                                                          tttCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCTGACGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACcgc                                          >  2:23864/1‑150 (MQ=255)                                                                                                           ttCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACcgcg                                         >  1:1429906/1‑150 (MQ=255)                                                                                                             ccccTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGcgac                                       <  2:1828190/150‑1 (MQ=255)                                                                                                                cTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGc                                                                                                             >  1:834878/1‑77 (MQ=255)                                                                                                                cTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGc                                                                                                             <  2:834878/77‑1 (MQ=255)                                                                                                                cTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCgacgac                                    >  1:72548/1‑150 (MQ=255)                                                                                                                 tttGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGc                                                                                                 >  2:1105754/1‑88 (MQ=255)                                                                                                                 tttGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGc                                                                                                 <  1:1105754/88‑1 (MQ=255)                                                                                                                  ttGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGCTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCg                                  >  2:1266706/1‑150 (MQ=255)                                                                                                                    gtgtTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCa                                <  1:402841/150‑1 (MQ=255)                                                                                                                     tgtTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCAc                               >  2:1377562/1‑150 (MQ=255)                                                                                                                       ttAAGGGGGTATTAAGGGCATGGCCGCCATGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTc                             >  2:220267/1‑150 (MQ=255)                                                                                                                           gggggTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCa                         >  1:1637081/1‑150 (MQ=255)                                                                                                                              ggTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATca                      >  2:1460383/1‑150 (MQ=255)                                                                                                                               gTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATcag                     >  2:345484/1‑150 (MQ=255)                                                                                                                               gTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATcag                     >  1:829176/1‑150 (MQ=255)                                                                                                                                tATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAggcggccatgcccttaatacccccttaacacaaaggggaaacactccctcacaatccttaacaaagtgtcatttgcgcagagccgggctcaagcgcagcatatccagccc                    <  1:1249875‑M2/150‑111 (MQ=255)                                                                                                                                tATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATcatc                    <  2:72548/150‑3 (MQ=255)                                                                                                                                 aTTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATcagca                   <  2:829176/150‑1 (MQ=255)                                                                                                                                  ttAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATcagcag                  >  2:1122670/1‑150 (MQ=255)                                                                                                                                    aaGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCt                >  2:1566518/1‑150 (MQ=255)                                                                                                                                     aGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAggcggccatgcccttaatacccccttaacacaaaggggaaacactccctcacaatccttaacaaagtgtcatttgcgcagagccgggctcaagcgcagcatatccagcccggtgt               >  2:1249875‑M2/1‑35 (MQ=255)                                                                                                                                      gggCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGc              >  2:1211402/1‑150 (MQ=255)                                                                                                                                        gCANGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCg            >  2:1197933/1‑150 (MQ=255)                                                                                                                                          aTGGCCGCCCTGCGGCTGTTCGCAGCACAAggcggccatgcccttaatacccccttaacacaaaggggaaacactccctcacaatccttaacaaagtgtcatttgcgcagagccgggctcaagcgcagcatatccagcccggtgtc              <  1:1896928‑M2/146‑117 (MQ=255)                                                                                                                                          aTGGCCGCCCTGCGGCTGTTCGCAGCACAAggcggccatgcccttaatacccccttaacacaaaggggaaacactccctcacaatccttaacaaagtgtcatttgcgcagagccgggctcaagcgcagcatatccagcccggtgtc              >  2:1896928‑M2/1‑30 (MQ=255)                                                                                                                                          aTGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCAAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGa          >  1:1517438/1‑150 (MQ=255)                                                                                                                                           tGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGaa         <  2:1637081/150‑1 (MQ=255)                                                                                                                                              ccgccttgtgctgcgaacagccgcagggcggccatgcccttaatacccccttaacacaaaggggaaacactccctcacaatccttaacaaagtgtcatttgcgcagagccgggctcaagcgcagcatatccagcccggtgtcgacccatt      >  1:1361107‑M1/1‑5 (MQ=255)                                                                                                                                              ccgccttgtgctgcgaacagccgcagggcggccatgcccttaatacccccttaacacaaaggggaaacactccctcacaatccttaacaaagtgtcatttgcgcagagccgggctcaagcgcagcatatccagcccggtgtcgacccatt      >  2:1730820‑M1/1‑5 (MQ=255)                                                                                                                                               cgccCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGtt     <  2:85694/150‑1 (MQ=255)                                                                                                                                               cgccCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCAACGCCACGACCGCACTCCCCATCAGCAGCTGCCGGAACGtt     >  1:100717/1‑150 (MQ=255)                                                                                                                                               cgccCCGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCTAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGtt     >  1:627354/1‑150 (MQ=255)                                                                                                                                                gccCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGttt    >  1:1406076/1‑150 (MQ=255)                                                                                                                                                gccCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGACAAGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGttt    >  1:601833/1‑150 (MQ=255)                                                                                                                                                 cccTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTc   <  1:26597/150‑1 (MQ=255)                                                                                                                                                  cttgtgctgcgaacagccgcagggcggccatgcccttaatacccccttaacacaaaggggaaacactccctcacaatccttaacaaagtgtcatttgcgcagagccgggctcaagcgcagcatatccagcccggtgtcgacccatttttc  <  2:609506‑M1/150‑150 (MQ=255)                                                                                                                                                  cttgtgctgcgaacagccgcagggcggccatgcccttaatacccccttaacacaaaggggaaacactccctcacaatccttaacaaagtgtcatttgcgcagagccgggctcaagcgcagcatatccagcccggtgtcgacccatttttc  >  1:609506‑M1/1‑1 (MQ=255)                                                                                                                                                  ccTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTcc  <  1:345484/150‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                      GATCTGTTGGGTGATGTCGAAAAATGGGTCGACACCGGGCTGGATATGCTGCGCTTGAGCCCGGCTCTGCGCAAATGACACTTTGTTAAGGATTGTGAGGGAGTGTTTCCCCTTTGTGTTAAGGGGGTATTAAGGGCATGGCCGCCCTGCGGCTGTTCGCAGCACAAGGCGGCTCTTGCAGCGAGTGCGTAGCCTTCAGCGGCCGCGCAATTGCCGGTCGGGCAAGGCCAGTGCCGCAAGCAGTCCCAGCACCGCGACGACCGCACTCCCCATCAGCAGCTGCCGGAACGTTTCC  >  NC_002947/1583409‑1583703

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.