New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 193693248 (0.640)4 (0.060) 4/236 NT 8.5% intergenic (+42/+48) PP_1736/PP_1737 hypothetical protein/hypothetical protein
?NC_002947 = 1936953 41 (0.590)intergenic (+63/+27) PP_1736/PP_1737 hypothetical protein/hypothetical protein

AGCTATTTGCTGTTTGAGGCCAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTTTCATACTCGAACGGCGAATTCAGCTGGCCATAGCGGAATTTGGTCGTA  >  NC_002947/1936786‑1937079
                                                                                                                                                  |                                                                                                                                                    
aGCTATTTGCTGTTTGAGGCCAGCTATTGCAGTGAACTGAGCGAGTTGGGGCGCAAGTATGCCTTGGCCAAGAAGCGCGAGCTTTGCGCATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAg                                                                                                                                                   <  2:701613/150‑1 (MQ=255)
       tGCTGTTTGAGGCCAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCCAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATtgt                                                                                                                                            <  1:698275/150‑1 (MQ=255)
        gCTGTTTGAGGCCAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATtgtg                                                                                                                                           <  2:1168754/150‑1 (MQ=255)
         cTGTTTGAGGCCAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTTCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTgtgt                                                                                                                                          <  1:1295022/150‑1 (MQ=255)
            tttGAGGCCAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAAt                                                                                                                                       <  1:1049551/150‑1 (MQ=255)
            tttGAGGCCAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTACTGCGAGGGGTTGTGTaag                                                                                                                                       >  2:1295022/1‑149 (MQ=255)
              tGAGGCCAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTCTCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGc                                                                                                                                     <  1:1056832/150‑1 (MQ=255)
                aGGCCAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGACCCCGCTCCTGCGAGGGATTGTGTAATGCCt                                                                                                                                   <  1:1485344/150‑1 (MQ=255)
                  gCCAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCtgc                                                                                                                                 >  2:1209126/1‑149 (MQ=255)
                   ccAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGTATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATtgt                                                                                                                                            <  2:1094415/138‑1 (MQ=255)
                   ccAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATtgt                                                                                                                                            >  1:1094415/1‑138 (MQ=255)
                    cAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTgc                                                                                                                               <  1:1555416‑M2/150‑3 (MQ=255)
                       cTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTgcagg                                                                                                                            <  1:1457780‑M2/150‑6 (MQ=255)
                         aTTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTgcaggag                                                                                                                          >  2:591413‑M2/1‑143 (MQ=255)
                          ttGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCGTGGTGATTTGAGGGTGCCTTTGCGCGCCCTTTCGCGGGTGCACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTgcaggagc                                                                                                                         <  2:855521‑M2/150‑9 (MQ=255)
                             cAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGATGCGCTGCGGCTCCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGaa                                                                                                                      <  2:529457/150‑1 (MQ=255)
                             cAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCacaggcattacacaatccctcgcaggagcg                                                                                                                        <  2:1131541‑M1/148‑31 (MQ=255)
                             cAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCacaggcattacacaatccctcgcaggagcg                                                                                                                        >  1:1131541‑M1/1‑118 (MQ=255)
                              aGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGaaa                                                                                                                     <  1:831275/150‑1 (MQ=255)
                              aGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGaaa                                                                                                                     >  1:615627/1‑150 (MQ=255)
                              aGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGaaa                                                                                                                     >  2:1875082/1‑150 (MQ=255)
                               gTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATGCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTgcaggagcgagag                                                                                                                    <  1:1474786‑M2/150‑14 (MQ=255)
                               gTGAACTGATCGAGTTGGGGAGCCAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAg                                                                                                                    >  2:1657040/1‑150 (MQ=255)
                                     tGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCgc                                                                                                              >  2:1879525/1‑150 (MQ=255)
                                          gAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGcagcag                                                                                                         <  1:1879525/150‑1 (MQ=255)
                                            gTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGACGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGc                                                                                                       <  2:216690/150‑1 (MQ=255)
                                                    gcAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCgcagc                                                                                                           <  2:43198/138‑1 (MQ=255)
                                                    gcAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCgcagc                                                                                                           >  1:43198/1‑138 (MQ=255)
                                                      aaGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCt                                                                                             <  1:644361/150‑1 (MQ=255)
                                                      aaGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCt                                                                                             >  2:204584/1‑150 (MQ=255)
                                                          aTGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCt                                                                                         <  2:1780275/150‑1 (MQ=255)
                                                             ccTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCa                                                                                      >  2:554255/1‑150 (MQ=255)
                                                              cTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCaa                                                                                     >  2:36263/1‑150 (MQ=255)
                                                                    cAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGa                                                                                                                                                    <  2:1869920/81‑1 (MQ=255)
                                                                    cAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGa                                                                                                                                                    >  1:1869920/1‑81 (MQ=255)
                                                                         agCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCt                                                                          <  1:1657040/150‑1 (MQ=255)
                                                                                       gAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTTGGTATACACATAc                                                            <  2:1457780/150‑1 (MQ=255)
                                                                                             cTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCAcc                                                     >  1:142076/1‑150 (MQ=255)
                                                                                              tGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCacaggcattacacaatccctcgcaggagcgg                                                                                                                       <  1:613709‑M1/84‑32 (MQ=255)
                                                                                              tGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCacaggcattacacaatccctcgcaggagcgg                                                                                                                       >  2:613709‑M1/1‑53 (MQ=255)
                                                                                              tGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCt                                                    >  2:908563/1‑150 (MQ=255)
                                                                                              tGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCt                                                    >  2:1649312/1‑150 (MQ=255)
                                                                                                gggATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTgca                                                                                                                              >  2:517698‑M2/1‑72 (MQ=255)
                                                                                                gggATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTgca                                                                                                                              <  1:517698‑M2/75‑4 (MQ=255)
                                                                                                  gATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTTTc                                                <  1:554255/150‑1 (MQ=255)
                                                                                                    tttGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTTTCAt                                              >  1:1345073/1‑150 (MQ=255)
                                                                                                              ccTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAg                                                                                                                    >  1:258622/1‑71 (MQ=255)
                                                                                                              ccTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAg                                                                                                                    <  2:258622/71‑1 (MQ=255)
                                                                                                               cTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTTTCATACTCGAACGGc                                   <  2:142076/150‑1 (MQ=255)
                                                                                                                       gCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTAGACACATACCGCACCTTTTCATACTCGAACGGCGAATTCAg                           >  2:1177578/1‑150 (MQ=255)
                                                                                                                        cccTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCAc                                                      >  1:1657884/1‑122 (MQ=255)
                                                                                                                        cccTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCAc                                                      <  2:1657884/122‑1 (MQ=255)
                                                                                                                         ccTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTTTCATACTAGAACGGCGAATTCAGCt                         <  2:1345073/150‑1 (MQ=255)
                                                                                                                          cTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTAGACACATACCGCACCTTTTCATACTCGAACGGCGAATTCAGCTg                        <  2:615627/150‑1 (MQ=255)
                                                                                                                           tttCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACATGGCGATCTTCAACTGGCGCGCCTGGGTATACACATACCGCACCTTTTCATACTCGAACGGCGAATTCAGCTgg                       >  1:1669783/1‑150 (MQ=255)
                                                                                                                               gcgGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTTTCATACTCGAACGGCGAATTCAGCTGGc                      <  1:1630562/147‑1 (MQ=255)
                                                                                                                               gcgGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTTTCATACTCGAACGGCGAATTCAGCTGGc                      >  2:1630562/1‑147 (MQ=255)
                                                                                                                                      ctctcgctcCTGCacaggcattacacaatccctcgcaggagcgggttcacccgcgaaagggcccgcaaaggcaacctcaaatccccaggcattcgcaaagctcgcgcttcttggccaaggcatccttgcgccccaactcgatcagttcac             <  1:1474786‑M1/146‑138 (MQ=255)
                                                                                                                                        cccGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTTTCATACTCGCACGGCGaa                                >  1:254333/1‑128 (MQ=255)
                                                                                                                                        cccGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTTTCATACTCGAACGGCGaa                                <  2:254333/128‑1 (MQ=255)
                                                                                                                                         ccGCTCCTGCGAGGGATTGTGTAATGCCTGTgcaggagcgggttcacccgcgaaagggcccgcaaaggcaacctcaaatcccca                                                                            >  2:613709‑M2/1‑31 (MQ=255)
                                                                                                                                         ccGCTCCTGCGAGGGATTGTGTAATGCCTGTgcaggagcgggttcacccgcgaaagggcccgcaaaggcaacctcaaatcccca                                                                            <  1:613709‑M2/84‑54 (MQ=255)
                                                                                                                                         ccGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTATTATGCTCGAACGGCGAATTCAGCTGGCCATAGCGGAAttt         >  1:497080/1‑150 (MQ=255)
                                                                                                                                          cGCTCCTGCGAGGGATTGTGTAATGCCTGTgcaggagcgggttcacccgcgaaagggcccgcaaaggcaacctcaaatccccaggaattcgcaaagctcgcgcttcttggccaaggcatccttgcgccccaactcgatcagttcactg           >  1:1131541‑M2/1‑30 (MQ=255)
                                                                                                                                          cGCTCCTGCGAGGGATTGTGTAATGCCTGTgcaggagcgggttcacccgcgaaagggcccgcaaaggcaacctcaaatccccaggaattcgcaaagctcgcgcttcttggccaaggcatccttgcgccccaactcgatcagttcactg           <  2:1131541‑M2/148‑119 (MQ=255)
                                                                                                                                           gCTCCTGCacaggcattacacaatccctcgcaggagcgggtgcacccgcgaaagggcgcgcaaaggcaccctcaaatcaccacgaattcgcaaagctcgcgcttcttggccaaggcatccttgcgccccaactcgatcagttcactgcaa        <  2:855521‑M1/150‑143 (MQ=255)
                                                                                                                                           gCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCACCATGAGAGCCTGGGTCTGCACTACGCTTAGCACGTCAGGCGCGAACGGCGAATTCAGCTGGCCATAGCGGAATTTgg       <  1:36263/150‑1 (MQ=255)
                                                                                                                                            cTCCTGCacaggcattacacaatccctcgcaggagcgggttcacccgcgaaagggcccgcaaaggcaacctcaaatccccaggaattcgcaaagctcgcgcttcttggccaaggcatccttgcgccccaactcgatcagttcactgcaat       >  2:591413‑M1/1‑7 (MQ=255)
                                                                                                                                            cTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTTTCATACTCGAACGGCGAATTCAGCTGGCCATAGCGGAATTTGGt      <  2:1555416/150‑1 (MQ=255)
                                                                                                                                              ccTGCacaggcattacacaatccctcgcaggagcgggttcacccgcgaaagggcccgcaaaggcaacctcaaatccccaggaattcgcaaagctcgcgcttcttggccaaggcatccttgcgccccaactcgatcagttcactgcaatag     <  1:1457780‑M1/150‑146 (MQ=255)
                                                                                                                                                tGCacaggcattacacaatccctcgcaggagcgggttcacccgcgaaagggcccgcaaaggcaacctcaaatccc                                                                              >  2:517698‑M1/1‑3 (MQ=255)
                                                                                                                                                tGCacaggcattacacaatccctcgcaggagcgggttcacccgcgaaagggcccgcaaaggcaacctcaaatccc                                                                              <  1:517698‑M1/75‑73 (MQ=255)
                                                                                                                                                tGCGAGGGATTGTGTAATGCCTGTGCAGGCGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTTTCATACTCGAACGGCGAATTCAGCTGGCCATAGCGGAATTTGGTCGta  >  1:444877/1‑150 (MQ=255)
                                                                                                                                                 gCacaggcattacacaatccctcgcaggagcgggttcacccgcgaaagggcccgcaaaggcaacctcaaatccccaggaattcgcaaagctcgcgcttcttggccaaggcatccttgcgccccaactcgatcagttcactgcaatagctg  <  1:1555416‑M1/150‑149 (MQ=255)
                                                                                                                                                  |                                                                                                                                                    
AGCTATTTGCTGTTTGAGGCCAGCTATTGCAGTGAACTGATCGAGTTGGGGCGCAAGGATGCCTTGGCCAAGAAGCGCGAGCTTTGCGAATTCCTGGGGATTTGAGGTTGCCTTTGCGGGCCCTTTCGCGGGTGAACCCGCTCCTGCGAGGGATTGTGTAATGCCTGTGCAGGAGCGAAAGGGCCGCAGCAGGCTTACTCGGCTATCTGCAACTTGCGCGCCTGGGTATACACATACCGCACCTTTTCATACTCGAACGGCGAATTCAGCTGGCCATAGCGGAATTTGGTCGTA  >  NC_002947/1936786‑1937079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.