New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3303921 =75 (1.010)4 (0.060) 5/240 NT 5.3% coding (514/1383 nt) cysS cysteine‑‑tRNA ligase
?NC_002947 3303954 = 73 (1.040)coding (547/1383 nt) cysS cysteine‑‑tRNA ligase

ACGCGATGATCCAGACGTTGATCGACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCACCTGCTGCCTGGGCGAGAGCTTC  >  NC_002947/3303772‑3304070
                                                                                                                                                      |                                                                                                                                                     
aCGCGATGATCCAGACGTTGATCGACAAAGGGTACGCCTACGCGCAAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTcg                                                                                                                                                       >  1:977463/1‑150 (MQ=255)
  actccaggtcgctgccgccaccgtgaatgtcgaagctctcgcccaggcagcaggtggacatgaccgagcactcgatgtgccagcccgggcgacccgggccccatggcgattcccagcttggctcgcccggcttgacgcccttccacagGa                                                                                                                                                      >  1:412129‑M1/149‑150 (MQ=255)
    tccaggtcgctgccgccaccgtgaatgtcgaagctctcgcccaggcagcaggtggacatgaccgagcactcgatgtgccagcccgggcgacccgggccccatggcgattcccagcttggctcgcccggcttgacgcccttccacagGACg                                                                                                                                                    <  1:1118622‑M1/4‑1 (MQ=255)
    tccaggtcgctgccgccaccgtgaatgtcgaagctctcgcccaggcagcaggtggacatgaccgagcactcgatgtgccagcccgggcgacccgggccccatggcgattcccagcttggctcgcccggcttgacgcccttccacagGACg                                                                                                                                                    <  2:1320178‑M1/4‑1 (MQ=255)
     ccaggtcgctgccgccaccgtgaatgtcgaagctctcgcccaggcagcaggtggacatgaccgagcactcgatgtgccagcccgggcgacccgggccccatggcgattcccagcttggctcgcccggcttgacgcccttccacagGACGa                                                                                                                                                   >  2:617782‑M1/146‑150 (MQ=255)
     atgatCCAGACGTTGATCGACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGANGaa                                                                                                                                                  <  2:1186713/150‑1 (MQ=255)
      caggtcgctgccgccaccgtgaatgtcgaagctctcgcccaggcagcaggtggacatgaccgagcactcgatgtgccagcccgggcgacccgggccccatggcgattcccagcttggctcgcccggcttgacgcccttccacagGACGaa                                                                                                                                                  >  1:1192243‑M1/145‑150 (MQ=255)
      caggtcgctgccgccaccgtgaatgtcgaagctctcgcccaggcagcaggtggacatgaccgagcactcgatgtgccagcccgggcgacccgggccccatggcgattcccagcttggctcgcccggcttgacgcccttccacagGACGaa                                                                                                                                                  >  2:329310‑M1/145‑150 (MQ=255)
         tCCAGACGTTGATCGACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCa                                                                                                                                              >  1:442381/1‑150 (MQ=255)
          tcgctgccgccaccgtgaatgtcgaagctctcgcccaggcagcaggtggacatgaccgagcactcgatgtgccagcccgggcgacccgggccccatggcgattcccagcttggctcgcccggcttgacgcccttccacagGACGAAg                                                                                                                                                 <  1:1652667‑M1/7‑1 (MQ=255)
          tcgctgccgccaccgtgaatgtcgaagctctcgcccaggcagcaggtggacatgaccgagcactcgatgtgccagcccgggcgacccgggccccatggcgattcccagcttggctcgcccggcttgacgcccttccacagGACGAAg                                                                                                                                                 >  2:1652667‑M1/141‑147 (MQ=255)
            aGACGTTGATCGACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCATGCATTTAGTGCGACGAAGCTaatc                                                                                                                                           <  2:392623/150‑3 (MQ=255)
            aGACGTTGATCGACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGc                                                                                                                                           >  1:461392/1‑150 (MQ=255)
            aGACGTTGATCGACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGc                                                                                                                                           >  1:456169/1‑150 (MQ=255)
             gACGTTGATCGACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCa                                                                                                                                          <  2:1659718/150‑1 (MQ=255)
             gACGTTGATCGACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCa                                                                                                                                          <  2:565443/150‑1 (MQ=255)
                    aTCGACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGCGTAGTACAGGGTTGTCAAGATCGTCTGCAACGGTAAGCTGTAGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGGGGTCGACGAAGCCAAGCAGGACCCg                                                                                                                                   >  1:37033/1‑150 (MQ=255)
                     tCGACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGc                                                                                                                                  >  2:1625962/1‑150 (MQ=255)
                       gACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTc                                                                                                                                <  1:1683770/150‑1 (MQ=255)
                       gACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGTACTGGACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGCCGACGAAGCCAAGCAGGACCCGCTc                                                                                                                                <  1:1453401/150‑1 (MQ=255)
                       gACAAAGAGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGCTGGCAAGTTCGTCGGCTACGGCAAGCTGTCTCGCAAGAGGATCGAAGACCTGAGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTc                                                                                                                                <  2:977463/150‑1 (MQ=255)
                          aaaGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGAc                                                                                                                             >  2:1637175/1‑150 (MQ=255)
                          aaaGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGAc                                                                                                                             >  1:1811081/1‑150 (MQ=255)
                          aaaGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGAc                                                                                                                             >  2:251600/1‑150 (MQ=255)
                          aaaGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGAGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGAc                                                                                                                             >  1:418368/1‑150 (MQ=255)
                           aatgtcgaagctctcgcccaggcagcaggtggacatgaccgagcactcgatgtgccagcccgggcgacccgggccccatggcgattcccagcttggctcgcccggcttgacgcccttccacagGACGAAGCCAAGCAGGACCCGCTCGAc                                                                                                                             >  1:1745371‑M1/124‑150 (MQ=255)
                            aGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACtt                                                                                                                           >  1:792844/1‑150 (MQ=255)
                             gggTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTc                                                                                                                          <  2:562297/150‑1 (MQ=255)
                             gggTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTc                                                                                                                          <  1:324213/150‑1 (MQ=255)
                                tACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTc                                                                                                                       <  1:1802895/150‑1 (MQ=255)
                                 gaagctctcgcccaggcagcaggtggacatgaccgagcactcgatgtgccagcccgggcgacccgggccccatggcgattcccagcttggctcgcccggcttgacgcccttccacagGACGAAGCCAAGCAGGACCCGCTCGACTTCGTc                                                                                                                       >  1:1397523‑M1/118‑150 (MQ=255)
                                      tACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTgg                                                                                                                 >  2:198435/1‑150 (MQ=255)
                                        cgcgCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGaa                                                                                                               <  1:1528351/150‑1 (MQ=255)
                                         gcgcCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAg                                                                                                              <  1:1625962/150‑1 (MQ=255)
                                                  aaTGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAg                                                                                                     >  1:2891/1‑150 (MQ=255)
                                                      gCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCgg                                                                                                 <  2:865493/150‑1 (MQ=255)
                                                          cGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGa                                                                                             <  2:1756634/150‑1 (MQ=255)
                                                          cGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGa                                                                                             <  2:23937/150‑1 (MQ=255)
                                                           gtgtACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAg                                                                                            >  1:1666319/1‑150 (MQ=255)
                                                           gtgtACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGCCAGTCACAGCAGATCGACGAAGCCAAGGAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAg                                                                                            >  1:1772005/1‑150 (MQ=255)
                                                            tgtACTCCCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGc                                                                                           <  2:1666319/150‑1 (MQ=255)
                                                             gtACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGcc                                                                                          >  1:1320178/1‑150 (MQ=255)
                                                                  acCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCt                                                                                     <  1:1495064/150‑1 (MQ=255)
                                                                   ccGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTg                                                                                    >  2:1616014/1‑150 (MQ=255)
                                                                      ggTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGa                                                                                 >  1:915700/1‑150 (MQ=255)
                                                                         tGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACATCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATc                                                                              <  2:425289/150‑1 (MQ=255)
                                                                              aGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCAt                                                                         <  1:1637175/150‑1 (MQ=255)
                                                                                ttCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATgg                                                                       >  2:957432/1‑150 (MQ=255)
                                                                                       gCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCgg                                                                <  2:1811081/150‑1 (MQ=255)
                                                                                           cGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCg                                                            >  1:1197395/1‑150 (MQ=255)
                                                                                             gCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCgggcgacc                                                          >  2:194122/1‑145 (MQ=255)
                                                                                               ccgggccccatggcgattcccagcttggctcgcccggcttgacgcccttccacagGACGAAGCCAAGCAGGACCCGCTCGACTTCGTc                                                                                                                       >  2:1258821‑M1/56‑88 (MQ=255)
                                                                                               ccgggccccatggcgattcccagcttggctcgcccggcttgacgcccttccacagGACGAAGCCAAGCAGGACCCGCTCGACTTCGTc                                                                                                                       <  1:1258821‑M1/33‑1 (MQ=255)
                                                                                                    gTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTg                                                   <  1:991179/150‑1 (MQ=255)
                                                                                                     tCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTgg                                                  <  2:442381/150‑1 (MQ=255)
                                                                                                       gcgcAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGca                                                >  1:1881293/1‑150 (MQ=255)
                                                                                                       gcgcAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGca                                                >  2:1240652/1‑150 (MQ=255)
                                                                                                        cgcAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGcac                                               <  2:1519754/150‑1 (MQ=255)
                                                                                                         gcAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGcacc                                              >  2:923876/1‑149 (MQ=255)
                                                                                                         gcAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGGCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGcacc                                              >  2:86331/1‑149 (MQ=255)
                                                                                                           aaGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCggg                                                                                                >  2:1832773/1‑98 (MQ=255)
                                                                                                           aaGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCggg                                                                                                <  1:1832773/98‑1 (MQ=255)
                                                                                                           aaGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATc                                            >  2:936083/1‑150 (MQ=255)
                                                                                                           aaGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATc                                            <  2:40885/150‑1 (MQ=255)
                                                                                                           aaGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGATCGACAAGGCCGGcacaac                                            >  2:1049150/1‑148 (MQ=255)
                                                                                                             gagGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACANCGa                                          <  2:1197395/150‑1 (MQ=255)
                                                                                                              agGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAg                                         <  1:1431161/150‑1 (MQ=255)
                                                                                                              agGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAg                                         <  1:1609542/150‑1 (MQ=255)
                                                                                                                   cGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATgg                                                                       >  1:1793505/1‑115 (MQ=255)
                                                                                                                   cGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATgg                                                                       <  2:1793505/115‑1 (MQ=255)
                                                                                                                    gAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCACACCGACTTCTCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCg                                   >  1:1789613/1‑150 (MQ=255)
                                                                                                                    gAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGc                                                                                                           >  2:855079/1‑78 (MQ=255)
                                                                                                                    gAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGc                                                                                                           <  1:855079/78‑1 (MQ=255)
                                                                                                                          cTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAATCCGTGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATg                             >  1:231386/1‑150 (MQ=255)
                                                                                                                          cTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATg                             >  1:335190/1‑150 (MQ=255)
                                                                                                                            gCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTc                           >  2:666240/1‑150 (MQ=255)
                                                                                                                            gCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTc                           <  2:335190/150‑1 (MQ=255)
                                                                                                                               tcgtggTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCAc                        >  2:1074556/5‑150 (MQ=255)
                                                                                                                               tATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCAc                        <  2:256880/150‑1 (MQ=255)
                                                                                                                                aTCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTggt                                                 >  1:410/1‑123 (MQ=255)
                                                                                                                                aTCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGc                                                 <  2:410/124‑1 (MQ=255)
                                                                                                                                     tGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCACctgctg                  >  1:1166637/1‑150 (MQ=255)
                                                                                                                                      gCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCACCtgctgc                 <  1:957432/150‑1 (MQ=255)
                                                                                                                                      gCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCACCtgctgc                 <  2:507146/150‑1 (MQ=255)
                                                                                                                                         cGCATCGAGGTCCACGAAGCCAAGCAGCACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCACCTGCTGCCTg              <  1:481161/150‑1 (MQ=255)
                                                                                                                                            aTCGAGGTCAAGGAAGCCAAGCAGGAACCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCACCTGCTGCCTGGGc           >  2:176737/1‑150 (MQ=255)
                                                                                                                                              cGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCACCTGCTGCCTGGGCga         <  2:418368/150‑1 (MQ=255)
                                                                                                                                               gAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCACCTGCTGCCTGGGCgag        <  1:1049150/150‑1 (MQ=255)
                                                                                                                                                 aGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCACCTGCTGCCTGGGCgaga       <  2:461392/150‑1 (MQ=255)
                                                                                                                                                  acagGACGAAGTCGAGCGGGTCCTGCTTGGCTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGa                                          >  1:232043‑M1/5‑114 (MQ=255)
                                                                                                                                                  acagGACGAAGTCGAGCGGGTCCTGCTTGGCTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGa                                          <  2:232043‑M1/110‑1 (MQ=255)
                                                                                                                                                   gTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCa                                                                          >  1:327736/1‑81 (MQ=255)
                                                                                                                                                   gTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCa                                                                          <  2:327736/81‑1 (MQ=255)
                                                                                                                                                      GACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCACCTGCTGCCTGGGCGAGAGCTTc  >  1:1237513‑M1/1‑150 (MQ=255)
                                                                                                                                                      GACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCACCTGCTGCCTGGGCGAGAGCTTc  <  2:378165‑M1/150‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
ACGCGATGATCCAGACGTTGATCGACAAAGGGTACGCCTACGCGCCAGGCAATGGCGACGTGTACTACCGGGTTGGCAAGTTCGTCGGCTACGGCAAGCTGTCGCGCAAGAGGATCGAAGACCTGCGTATCGGTGCACGCATCGAGGTCGACGAAGCCAAGCAGGACCCGCTCGACTTCGTCCTGTGGAAGGGCGTCAAGCCGGGCGAGCCAAGCTGGGAATCGCCATGGGGCCCGGGTCGCCCGGGCTGGCACATCGAGTGCTCGGTCATGTCCACCTGCTGCCTGGGCGAGAGCTTC  >  NC_002947/3303772‑3304070

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.