New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3513532	58 (0.780)	6 (0.080)	5/244	NT	9.2%	coding (2157/4158 nt)	PP_3108	rhs family protein
	?	NC_002947	= 3513567	63 (0.880)					coding (2192/4158 nt)	PP_3108	rhs family protein

GCTGGCGCGCAAGCCCGACGGCGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCTTTGCCTACGACGCTTCGGACCGACTGAGCGAAGAAGTGC  >  NC_002947/3513388‑3513680                                                                                                                                                 |                                                                                                                                                     gCTGGCGCGCAAGCCCGACGGCGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCt                                                                                                                                                 <  2:646435/150‑1 (MQ=255) gCTGGCGCGCAAGCCCGACGGCGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCt                                                                                                                                                 >  2:502410/1‑150 (MQ=255)      cgcgcAAGCCCGACGGCGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGa                                                                                                                                            <  2:651335/150‑1 (MQ=255)                cGACGGCGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCa                                                                                                                                  <  2:1080113/150‑1 (MQ=255)                cGACGGCGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCa                                                                                                                                  >  1:1699697/1‑150 (MQ=255)                 gACGGCGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAg                                                                                                                                 >  2:1087817/1‑150 (MQ=255)                   cGGCGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGa                                                                                                                               <  2:1491174/150‑1 (MQ=255)                      cGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGc                                                                                                                            <  1:158687/150‑1 (MQ=255)                         aGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCaa                                                                                                                         <  1:502410/150‑1 (MQ=255)                          gTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAg                                                                                                                        <  2:1699697/150‑1 (MQ=255)                                   aTCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAgcgg                                                                                                               >  1:310929‑M2/1‑146 (MQ=255)                                        ccACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACCCCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCtggcccttggcatcctggcggctgctcggcaggccgcgggccgt                                                                                                          <  1:1916442‑M1/150‑45 (MQ=255)                                        ccACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCtggcccttggcatcctggcggctgctcggcaggccgcgggccgt                                                                                                          <  2:1722036‑M1/150‑45 (MQ=255)                                        ccACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGACGCCAAGATGCCAAGGGCCAGCGGGTTCg                                                                                                          >  1:393232/1‑150 (MQ=255)                                        ccACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGACCCGCtggcccttggcatcctggcggctgctcggcaggccgcgggccgt                                                                                                          >  1:1335708‑M1/1‑106 (MQ=255)                                         cACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGc                                                                                                         <  2:1274457/150‑1 (MQ=255)                                         cACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGACCCGCtggcccttggcatcctggcggctgctcggcaggccgcgggccgtg                                                                                                         <  2:1335708‑M1/150‑46 (MQ=255)                                              ggACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGa                                                                                                    <  2:1210578/150‑1 (MQ=255)                                              ggACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGa                                                                                                    <  2:1273357/150‑1 (MQ=255)                                              ggACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGa                                                                                                    <  2:594964/150‑1 (MQ=255)                                                  ggCACCACGGAAAGCTTCCCCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTAc                                                                                                <  1:1662975/150‑1 (MQ=255)                                                  ggCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTAc                                                                                                >  1:1268809/1‑150 (MQ=255)                                                       cacGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCATGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACaa                                                                                           <  2:1093686/150‑1 (MQ=255)                                                       cacGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCa                                                                                                                                  >  1:795970/1‑111 (MQ=255)                                                       cacGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCa                                                                                                                                  <  2:795970/111‑1 (MQ=255)                                                          ggAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTa                                                                                                 >  1:601335/1‑141 (MQ=255)                                                          ggAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTa                                                                                                 <  2:601335/141‑1 (MQ=255)                                                                cTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATgcg                                                                                  >  2:1546872/1‑150 (MQ=255)                                                                 ttCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATgcgc                                                                                 >  1:1723477/1‑150 (MQ=255)                                                                 ttCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATgcgc                                                                                 >  1:73723/1‑150 (MQ=255)                                                                 ttCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATgcgc                                                                                 >  2:1816498/1‑150 (MQ=255)                                                                   cACCTACGACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCTAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACTACAAGGCCATGCGCCt                                                                               <  2:976572/150‑1 (MQ=255)                                                                      cTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGa                                                                                                    <  1:788342/126‑1 (MQ=255)                                                                      cTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGa                                                                                                    >  2:788342/1‑126 (MQ=255)                                                                      cTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAgg                                                                                         >  1:96311/1‑137 (MQ=255)                                                                      cTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAgg                                                                                         <  2:96311/137‑1 (MQ=255)                                                                      cTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGAc                                                                            >  1:1108278/1‑150 (MQ=255)                                                                      cTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGAc                                                                            >  2:1385097/1‑150 (MQ=255)                                                                      cTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGAc                                                                            >  2:1341805/1‑150 (MQ=255)                                                                        aCAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACcg                                                                          >  2:1448091/1‑150 (MQ=255)                                                                          aaCGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACcgcg                                                                        >  2:1025075/1‑150 (MQ=255)                                                                          aaCGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGACCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACcgcg                                                                        >  1:1010278/1‑150 (MQ=255)                                                                                tACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCCGGCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTc                                                                  <  2:153374/150‑1 (MQ=255)                                                                                     tCATGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCt                                                                               >  2:506025/1‑132 (MQ=255)                                                                                     tCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCt                                                                               <  1:506025/132‑1 (MQ=255)                                                                                        ggTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGaaaa                                                          >  2:1126954/1‑150 (MQ=255)                                                                                            cTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAaacacc                                                      <  2:73723/150‑3 (MQ=255)                                                                                             tCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGa                                                                                                    <  1:780133/103‑1 (MQ=255)                                                                                             tCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGa                                                                                                    >  2:780133/1‑103 (MQ=255)                                                                                                 ccACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCAc                                                 <  1:820208/150‑1 (MQ=255)                                                                                                 ccACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCAc                                                 <  2:1515666/150‑1 (MQ=255)                                                                                                   acacCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGt                                               >  1:1900236/1‑150 (MQ=255)                                                                                                     acCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTAc                                             <  1:1137478/150‑1 (MQ=255)                                                                                                       cGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAg                                           <  2:860598/150‑1 (MQ=255)                                                                                                           ggCAAGGGCCAGACCACCCGCCTGATGCGCACGGCTCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCttt                                       <  2:1335683/150‑1 (MQ=255)                                                                                                           ggCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCttt                                       <  1:1546872/150‑1 (MQ=255)                                                                                                           cgCAAGAACCATACCGCCCGCCTGATGCGCACGGCCCGCGGCCTGCCGGGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTATGAGTACGAAACGTCTAGGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCttt                                       <  2:265760/149‑1 (MQ=255)                                                                                                              aaGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCtggcccttggcatcctggcggctgctcggcaggccgcgggccgtgc                                                                                                        >  2:286580‑M1/1‑36 (MQ=255)                                                                                                              aaGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCtggcccttggcatcctggcggctgctcggcaggccgcgggccgtgc                                                                                                        <  1:286580‑M1/82‑47 (MQ=255)                                                                                                              aaGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCTTTGcc                                    >  1:1220274/1‑150 (MQ=255)                                                                                                                 ggCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCTTTGCCTac                                 >  2:435338/1‑150 (MQ=255)                                                                                                                            ccGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACAGCGCTGGTCAACGAAAACAACGCCACGTACAGCTTTGCCTACGACGCTTCGGa                      >  2:1535516/1‑150 (MQ=255)                                                                                                                              gCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCAAATACAATGACAGCGGTGCGCAGGAAGTCAACGAGCACCACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCTTTGCCTACGACGCTTCGGAcc                    >  1:513520/1‑150 (MQ=255)                                                                                                                                    tGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCTTTGCCTACGACGCTTCGGACCGACTGa              <  2:513520/150‑1 (MQ=255)                                                                                                                                       gcACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAgcgggccgtgcgcatcaggcgggtggtctggccctt                                                                               >  2:286580‑M2/1‑46 (MQ=255)                                                                                                                                       gcACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAgcgggccgtgcgcatcaggcgggtggtctggccctt                                                                               <  1:286580‑M2/82‑37 (MQ=255)                                                                                                                                        cACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAgcgggtcgtgcgcatcaggcgggtggtctggcccttgccgtcggtgtggctgagcacctgaccgtagacgttgtaggtgaagctttccgtggtgccgtccgggtg          <  2:1335708‑M2/150‑106 (MQ=255)                                                                                                                                         aCGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAgcgggtcgtgcgcatcaggcgggtggtctggcccttgccgtcggtgtggctgagcacctgaccgtagacgttgtaggtgaagctttccgtggtgccgtccgggtgg         >  1:1335708‑M2/1‑44 (MQ=255)                                                                                                                                         aCGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAgcgggccgtgcgcatcaggcgggtggtctggcccttgccgtcggtgtggctgagcacctgaccgtagacgttgtaggtgaagctttccgtggtgccgtccgggtgg         <  2:1722036‑M2/150‑107 (MQ=255)                                                                                                                                         aCGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAgcgggccgtgcgcatcaggcgggtggtctggcccttgccgtcggggtggctgagcacctgaccgtagacgttgtaggtgaagctttccgtggtgccgtccgggtgg         <  1:1916442‑M2/150‑107 (MQ=255)                                                                                                                                          cGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCTTTGCCTACGACGCTTCGGACCGACTGAGCgaag        <  1:1299190/150‑1 (MQ=255)                                                                                                                                          cGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCTTTGCCTACGACGCTTCGGACCGACTGAGCgaag        <  1:1126954/150‑1 (MQ=255)                                                                                                                                           ggCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCTTTGCCTACGACGCTTCGGACCGACTGAGCgaaga       <  2:1289316/150‑1 (MQ=255)                                                                                                                                              ccGCtggcccttggcatcctggcggctgctcggcaggccgcgggccgtgcgcatcaggcgggtggtctggcccttgccgtcggtgtggctgagcacctgaccgtagacgttgtaggtgaagctttccgtggtgccgtccgggtggctgat    >  1:310929‑M1/1‑4 (MQ=255)                                                                                                                                                gcgGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCTTTGCCTACGACGCTTCGGACCGACTGAGCGAAGAAGTGc  <  2:1220274/150‑1 (MQ=255)                                                                                                                                                 |                                                                                                                                                     GCTGGCGCGCAAGCCCGACGGCGAAGTGCTGCGCATCAGCCACCCGGACGGCACCACGGAAAGCTTCACCTACAACGTCTACGGTCAGGTGCTCAGCCACACCGACGGCAAGGGCCAGACCACCCGCCTGATGCGCACGGCCCGCGGCCTGCCGAGCAGCCGCCAGGATGCCAAGGGCCAGCGGGTTCGCTACGAGTACGACAAGGCCATGCGCCTGACCGCGCTGGTCAACGAAAACAACGCCACGTACAGCTTTGCCTACGACGCTTCGGACCGACTGAGCGAAGAAGTGC  >  NC_002947/3513388‑3513680

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.