New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 5112607 =43 (0.580)8 (0.130) 8/210 NT 18.3% intergenic (‑148/+118) rluB/PP_4497 23S rRNA pseudouridylate synthase B/hypothetical protein
?NC_002947 5112712 = 36 (0.580)intergenic (‑253/+13) rluB/PP_4497 23S rRNA pseudouridylate synthase B/hypothetical protein

ATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACC  >  NC_002947/5112458‑5112755
                                                                                                                                                     |                                                                                                                                                    
aTCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCttt                                                                                                                                                      <  1:1267885/150‑1 (MQ=255)
aTCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCttt                                                                                                                                                      >  2:1788561/1‑150 (MQ=255)
 aaagaggagaccagcttccgtagcctgttggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgcctg                                                                                                                                                     <  1:1796093‑M1/2‑1 (MQ=255)
     ggCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCt                                                                                                                                                 <  2:1510774/150‑1 (MQ=255)
      ggagaccagcttccgtagcctgttggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTg                                                                                                                                                <  1:937008‑M1/7‑1 (MQ=255)
      gCACCTCCCTGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTAGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTg                                                                                                                                                >  2:1269548/1‑150 (MQ=255)
        aCCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGc                                                                                                                                              <  2:1064030/150‑1 (MQ=255)
          accagcttccgtagcctgttggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTgg                                                                                                                                               >  1:447162‑M1/140‑147 (MQ=255)
          accagcttccgtagcctgttggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTgg                                                                                                                                               <  2:447162‑M1/8‑1 (MQ=255)
           cccgcgtccgtagcctgttggtggagctggatgccatggaagacggtttgataaccgattttgatgctctgcggggagaggagcctgagccttcggtggaggaggcgctcaacgctcagccctgattgatctgctgccTGTGCTGGCctc                                                                                                                                           >  2:564456‑M1/139‑150 (MQ=255)
            cagcttccgtagcctgttggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCctct                                                                                                                                          <  2:278421‑M1/13‑1 (MQ=255)
               cttccgtagcctgttggtggagctggatgcgatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTcg                                                                                                                                       <  2:1116894‑M1/16‑1 (MQ=255)
                ttccgtagcctgttggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTcgc                                                                                                                                      >  2:485267‑M1/134‑150 (MQ=255)
                 tgtAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTCGTACGTGTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTcgcg                                                                                                                                     <  1:1788561/150‑1 (MQ=255)
                  gtAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCgg                                                                                                                                    <  1:1485338/150‑1 (MQ=255)
                  ccgtagcctgttggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTg                                                                                                                                                <  1:53354‑M1/7‑1 (MQ=255)
                  ccgtagcctgttggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTg                                                                                                                                                >  2:53354‑M1/132‑138 (MQ=255)
                  ccgtagcctgttggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCgg                                                                                                                                    <  1:1908960‑M1/19‑1 (MQ=255)
                  ccgtagcctgttggtggagctggatgccatggaagacggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCgg                                                                                                                                    >  2:1556214‑M1/132‑150 (MQ=255)
                    gtagcctgttggtggagctggatgccatgggagacggtttgacaaccgattttgatgctctgcgggggggggagcctgagcctccggtgggggagccgctcggggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGcgggg                                                                                                                                  <  1:1552546‑M1/21‑2 (MQ=255)
                     ggAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCa                                                                                                                                 >  2:32273/1‑150 (MQ=255)
                              aCAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTNCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTc                                                                                                                        >  1:1679048/1‑150 (MQ=255)
                               cAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTcc                                                                                                                       >  2:1131626/1‑150 (MQ=255)
                                       tGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCttt                                                                                                                                                      <  2:1573365/111‑1 (MQ=255)
                                       tGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCttt                                                                                                                                                      >  1:1573365/1‑111 (MQ=255)
                                              gaACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGcgt                                                                                                                                >  2:1813006/1‑124 (MQ=255)
                                              gaACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGcgt                                                                                                                                <  1:1813006/126‑3 (MQ=255)
                                                  gcgcCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCtt                                                                                                    >  2:1672312/1‑150 (MQ=255)
                                                     ccAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCgg                                                                                                 <  1:205100/150‑1 (MQ=255)
                                                      cggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggacatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCtt                                                                                                                                         <  1:1913510‑M1/14‑1 (MQ=255)
                                                      cggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggacatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCtt                                                                                                                                         >  2:1913510‑M1/96‑109 (MQ=255)
                                                      cAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACCTGTTCGCGCAACCTTCggg                                                                                                >  2:1796093/1‑150 (MQ=255)
                                                       ggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCgg                                                                                                                                    >  1:101533‑M1/95‑113 (MQ=255)
                                                       ggtttgaaaaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCgg                                                                                                                                    <  2:101533‑M1/19‑1 (MQ=255)
                                                       aaaaGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCgggg                                                                                               >  1:1573156/1‑150 (MQ=255)
                                                       aaaaGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCgggg                                                                                               <  1:32273/150‑1 (MQ=255)
                                                           ggCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGGTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCtg                                                                                           >  1:613425/1‑150 (MQ=255)
                                                            gCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCtgt                                                                                          <  2:1632536/150‑1 (MQ=255)
                                                             ccGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCtgtg                                                                                         >  1:278421/1‑150 (MQ=255)
                                                               gcgcATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCaa                                                                                                        >  2:863680/1‑133 (MQ=255)
                                                               gcgcATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCaa                                                                                                        <  1:863680/133‑1 (MQ=255)
                                                               gcgcATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGAt                                                                                       >  2:186180/1‑150 (MQ=255)
                                                               aaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTc                                                                                                                                        <  1:1493174‑M1/15‑1 (MQ=255)
                                                               aaccgattttgatgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTc                                                                                                                                        >  2:1493174‑M1/87‑101 (MQ=255)
                                                                   atcatACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGGTTTGTGGGGCTGGGCATGATTTTCGGCGCGGTGGGCTTTGTGCTGTCCTCTTCACGGGCACTCGCGCTCCTACATGTTCGCGCAACCCTCGCGCCCCTTGATTccc                                                                                   >  1:1570507/1‑150 (MQ=255)
                                                                           tgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGggctt                                                                                                                                <  1:1298865‑M1/23‑3 (MQ=255)
                                                                           tgatctgcggggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGggctt                                                                                                                                >  2:1298865‑M1/75‑95 (MQ=255)
                                                                             gTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGc                                                                         <  2:773799/150‑1 (MQ=255)
                                                                               tcatcaGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCgg                                                                       <  2:1844173/150‑1 (MQ=255)
                                                                                catcaGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCggg                                                                      <  2:1211325/150‑1 (MQ=255)
                                                                                 atcaGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGc                                                                     <  1:1001627/150‑1 (MQ=255)
                                                                                    aGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTTATCCCCCTCTGCGAGCGGGCGTg                                                                  >  2:1883467/1‑150 (MQ=255)
                                                                                     ggagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGTTTGc                                                                 >  2:1908960‑M1/65‑150 (MQ=255)
                                                                                      gagaggagcctgagcctccggtggaggaggagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGcc                                                                >  1:68756‑M1/64‑150 (MQ=255)
                                                                                         aaCGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCcgc                                                             <  1:1672312/150‑1 (MQ=255)
                                                                                             cACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCgg                                                                                                 <  2:1629538/110‑1 (MQ=255)
                                                                                             cACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCgg                                                                                                 >  1:1629538/1‑110 (MQ=255)
                                                                                              aCTGGAGGGTAGAGGGTTTTGTGGGGACGGTCATGAGTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAaga                                                        <  2:1679048/150‑1 (MQ=255)
                                                                                                 ggAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGc                                                     <  1:186180/150‑1 (MQ=255)
                                                                                                       tAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTtgtg                                                                                                                                                   <  1:1063244/50‑1 (MQ=255)
                                                                                                       tAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTtgtg                                                                                                                                                   >  2:1063244/1‑50 (MQ=255)
                                                                                                       tAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAaga                                                        >  1:1053196/1‑141 (MQ=255)
                                                                                                       tAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAaga                                                        <  2:1053196/141‑1 (MQ=255)
                                                                                                          agGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAgg                                            >  2:1378709/1‑150 (MQ=255)
                                                                                                               tttGTGGGGCTAGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGgcagca                                       <  1:1269548/150‑1 (MQ=255)
                                                                                                                 tgtgGGGCTGGGCATGATTTTCTGCCTCGTGGGCTTTGTGTTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTAGCGCAGCCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGa                                     <  2:1570507/150‑1 (MQ=38)
                                                                                                                   gagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGc                                                                     >  1:1898444‑M1/35‑116 (MQ=255)
                                                                                                                   gagatcaaggctcagccctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGc                                                                     <  2:1898444‑M1/82‑1 (MQ=255)
                                                                                                                          gggCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAgg                            <  1:1131626/150‑1 (MQ=255)
                                                                                                                          gggCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAgg                            <  2:1027436/150‑1 (MQ=255)
                                                                                                                            gCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGc                          >  1:1025562/1‑150 (MQ=255)
                                                                                                                             cATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGt                                                                                                                <  1:1437185/63‑1 (MQ=255)
                                                                                                                             cATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGt                                                                                                                >  2:1437185/1‑63 (MQ=255)
                                                                                                                             cATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCt                         >  1:24252/1‑150 (MQ=255)
                                                                                                                                   cctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGccc                                                               <  2:216299‑M1/88‑1 (MQ=255)
                                                                                                                                   cctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGccc                                                               >  1:216299‑M1/19‑106 (MQ=255)
                                                                                                                                    ctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCtt                                                                   <  1:1526333‑M1/84‑1 (MQ=255)
                                                                                                                                    ctgattgatctgctgccTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCtt                                                                   >  2:1526333‑M1/18‑101 (MQ=255)
                                                                                                                                                   tttGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCAc   >  1:1846649/1‑150 (MQ=255)
                                                                                                                                                    ttGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGGTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCAcc  <  1:100119/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
ATCTGGGCACCTCCCGGTGTAGGAATGAAAACAGGTTTCTGGCGACGAACGCGCCAAAAGGCCGCGCATCATACGCGGTTCATCAGGGGAACGCACTGGAGGGTAGAGGGTTTTGTGGGGCTGGGCATGATTTTCTGCCCAGTGGGCTTTGTGCTGGCCTCTTCGCGGGCACGCCCGCTCCTACATGTTCGCGCAACCTTCGGGGCCTGTGATACCCCTGTGGGAGCGGGCTTGCCCGCGAAGAGGCCAGCACAGGCAGCAGATCAATCAGGGCTGAGCCTTGATCTCCTCCTCCACC  >  NC_002947/5112458‑5112755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.