New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5616257 =	68 (0.910)	4 (0.060)	4/244	NT	6.3%	coding (1255/1809 nt)	msbA	lipid A export ATP‑binding/permease MsbA
	?	NC_002947	5616292 =	53 (0.740)					coding (1220/1809 nt)	msbA	lipid A export ATP‑binding/permease MsbA

GCCGCGGCGGCTTCGATGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGACAAAACTGATATCGCTCAGCACTTCA  >  NC_002947/5616109‑5616405                                                                                                                                                     |                                                                                                                                                     gtaacctgagctttacctacccgggtaccgagcgtgaagtgctgagcgatatcagttttgtcgccgagcccgggcataatatcgccctggtcggccgctccggcagtggcgaggcgacccgggcgacgctgatcccgcgcttctatcacc                                                                                                                                                     <  1:423401‑M1/2‑1 (MQ=255) gtaacctgagctttacctacccgggtaccgagcgtgaagtgctgagcgatatcagttttgtcgccgagcccgggcagatgatcgccctggtcggccgctccggcagtggcaagtccaccctggcggcgctgatcccgcgcttctatcacc                                                                                                                                                     <  1:1225522‑M1/2‑1 (MQ=255) gtaacctgagctttacctacccgggtaccgagcgtgaagtgctgagcgatatcagttttgtcgccgagcccgggcagatgatcgccctggtcggccgctccggcagtggcaagtccaccctggcggcgctgatcccgcgcttctatcacc                                                                                                                                                     <  1:1319639‑M1/2‑1 (MQ=255) gCCGCGGCGGCTTCGATGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTcc                                                                                                                                                     <  2:1225606/150‑1 (MQ=255)  ccGCGGCGGCTTCGATGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCATGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCa                                                                                                                                                    <  2:610062/150‑1 (MQ=255)   cgcgGCGGCTTCGATGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCAc                                                                                                                                                   <  1:227713/150‑1 (MQ=255)      ctgagctttacctacccgggtaccgagcgtgaagtgctgagcgatatcagttttgtcgccgagcccgggcagatgatcgccctggtcggccgctccggcagtggcaagtccaccctggcggcgctgatcccgcgcttctatcaCCACGcc                                                                                                                                                <  1:200689‑M1/7‑1 (MQ=255)         ggcTTCGATGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATc                                                                                                                                             <  2:812426/150‑1 (MQ=255)          gcTTCGATGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCg                                                                                                                                            >  2:1041728/1‑150 (MQ=255)            ttCGATGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGc                                                                                                                                                 <  2:758450/143‑1 (MQ=255)            ttCGATGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGc                                                                                                                                                 >  1:758450/1‑143 (MQ=255)            ttCGATGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAg                                                                                                                                          >  2:1441209/1‑150 (MQ=255)              cGATGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCa                                                                                                                                        <  1:1925579/150‑1 (MQ=255)                aTGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTTGGTGACTTGCGAAACATGGCGATGCTGGTTACGTACGGGATAGTGCTCGATCTCCACGCCATCGAGCAgg                                                                                                                                      <  2:848700/150‑1 (MQ=255)                aTGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAgg                                                                                                                                      <  1:866438/150‑1 (MQ=255)                aTGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAAGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGGTAGTGCTCGATCTCCACGCCa                                                                                                                                               >  1:597339/1‑141 (MQ=255)                aTGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAAGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGGTAGTGCTCGATCTCCACGCCa                                                                                                                                               <  2:597339/141‑1 (MQ=255)                     tGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTg                                                                                                                                 >  1:44582/1‑150 (MQ=255)                     ggcgcgcGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTg                                                                                                                                 >  2:423401/2‑150 (MQ=255)                      gcgcgcGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGc                                                                                                                                <  1:1195597/150‑1 (MQ=255)                      gcgcgcGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGc                                                                                                                                <  2:513480/150‑1 (MQ=255)                        gcgcggcgcgCCGTCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGccc                                                                                                                              >  1:131742/1‑150 (MQ=255)                            ccgagcgtgaagtgctgagcgatatcagttttgtcgccgagcccgggcagatgatcgccctggtcggccgctccggcagtggcaagtccaccctggcggcgctgatcccgcgcttctatcaCCACGCCATCGAGCAGGATCTGCCCCTTg                                                                                                                          >  2:200689‑M1/122‑150 (MQ=255)                                cgcCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCgt                                                                                                                      <  2:1793516/150‑1 (MQ=255)                                cgcCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCgt                                                                                                                      >  2:1100928/1‑150 (MQ=255)                                 gccgccCAGCTCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCgtg                                                                                                                     <  1:162875/150‑1 (MQ=255)                                   tgaagtgctgagcgatatcagttttgacaacgaggccgcgcatattgtcgccctggtcggccgctccggcagtgccaagtccaccctggcggcgctgatcccgcgcttctatcaCCACGCCATCGAGCAGGATCTGCCCCTTGTCgtggt                                                                                                                   >  1:887475‑M1/115‑150 (MQ=255)                                   cGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCgtg                                                                                                                     >  2:629219/1‑148 (MQ=255)                                   cGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCgtg                                                                                                                     <  1:629219/148‑1 (MQ=255)                                     gCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGa                                                                                                                 <  2:44582/150‑1 (MQ=255)                                      ccAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGAt                                                                                                                <  2:1791904/150‑1 (MQ=255)                                       cAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATa                                                                                                               <  2:819224/150‑1 (MQ=255)                                           tCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAg                                                                                                           >  2:1872651/1‑150 (MQ=255)                                              ccATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAgcgc                                                                                                        >  1:211215/1‑150 (MQ=255)                                              ccATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAgcgc                                                                                                        >  2:1402092/1‑150 (MQ=255)                                              ccATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAgcgc                                                                                                        <  1:375741/150‑1 (MQ=255)                                                   aGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGc                                                                                                                                         >  2:531294/1‑112 (MQ=255)                                                   aGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGc                                                                                                                                         <  1:531294/112‑1 (MQ=255)                                                             ttgGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAgcgc                                                                                             >  2:303089/1‑146 (MQ=255)                                                             ttgGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAgcgc                                                                                             <  1:303089/146‑1 (MQ=255)                                                               ggCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGc                                                                                                                                <  1:186363/109‑1 (MQ=255)                                                               ggCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGc                                                                                                                                >  2:186363/1‑109 (MQ=255)                                                               ggCCACGGTGTCGTCGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGNCAg                                                                                       <  2:1194907/150‑1 (MQ=255)                                                                 ccACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGcgcg                                                                                                       <  2:125423/132‑1 (MQ=255)                                                                 ccACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGcgcg                                                                                                       >  1:125423/1‑132 (MQ=255)                                                                 ccACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAggg                                                                                     >  2:1121692/1‑150 (MQ=255)                                                                      gtgtCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGAc                                                                                <  2:1232150/150‑1 (MQ=255)                                                                        gtCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACtt                                                                              <  2:327446/150‑1 (MQ=255)                                                                          cGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGc                                                                            <  1:1465994/150‑1 (MQ=255)                                                                            ttGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCATCGCTATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCa                                                                          <  2:1808005/150‑1 (MQ=255)                                                                                gatcgccctggtcggccgctccggcagtggcaagtccaccctggcggcgctgatcccgcgcttctatcaCCACGCCATCGAGCAGGATCTGCCCCTTGTCgt                                                                                                                      <  2:1433975‑M1/33‑1 (MQ=255)                                                                                gatcgccctggtcggccgctccggcagtggcaagtccaccctggcggcgctgatcccgcgcttctatcaCCACGCCATCGAGCAGGATCTGCCCCTTGTCgt                                                                                                                      >  1:1433975‑M1/70‑102 (MQ=255)                                                                                aCAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGc                                                                      >  1:202563/1‑150 (MQ=255)                                                                                 cAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAg                                                                                                           >  1:564544/1‑112 (MQ=255)                                                                                 cAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAg                                                                                                           <  2:564544/112‑1 (MQ=255)                                                                                    ggTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGa                                                                  >  1:872233/1‑150 (MQ=255)                                                                                          aTGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGcc                                                            <  2:1741449/150‑1 (MQ=255)                                                                                           tGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCg                                                           >  2:1575748/1‑150 (MQ=255)                                                                                                  tGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAggg                                                    <  1:1441209/150‑1 (MQ=255)                                                                                                      ttGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAgcg                                                                                                         <  2:1344648/93‑1 (MQ=255)                                                                                                      ttGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAgcg                                                                                                         >  1:1344648/1‑93 (MQ=255)                                                                                                      ttGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGat                                                >  2:1643308/1‑150 (MQ=255)                                                                                                          gAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGatcctc                                            >  2:43606/1‑150 (MQ=255)                                                                                                            aaCATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGc                                                                      >  2:1507734/1‑122 (MQ=255)                                                                                                            aaCATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGc                                                                      <  1:1507734/122‑1 (MQ=255)                                                                                                             aCATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCCCTGCCGGAGCGGCCGACCAGGGCGGTCATCTGc                                         >  2:633160/1‑150 (MQ=255)                                                                                                              cATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCCCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCCGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGcc                                        <  1:1216814/150‑1 (MQ=255)                                                                                                                       gCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAgg                                                                                      >  2:1746388/1‑95 (MQ=255)                                                                                                                       gCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAgg                                                                                      <  1:1746388/95‑1 (MQ=255)                                                                                                                         aGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCg                             >  1:442807/1‑150 (MQ=255)                                                                                                                          ggTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGTCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGa                            <  2:1774719/150‑1 (MQ=255)                                                                                                                          ggTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGa                            <  2:1626676/150‑1 (MQ=255)                                                                                                                           gTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGAc                           >  1:878490/1‑150 (MQ=255)                                                                                                                               cGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGACaaaa                       <  1:1402092/150‑1 (MQ=255)                                                                                                                                   ggCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGTCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGACAAAACTGa                   >  2:218819/1‑150 (MQ=255)                                                                                                                                   ggCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGTCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGACAAAACTGa                   <  1:218819/150‑1 (MQ=255)                                                                                                                                    gCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGACAAAACTGat                  <  2:131742/150‑1 (MQ=255)                                                                                                                                          gTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGACAAAACTGATATCGCt            <  1:1575748/150‑1 (MQ=255)                                                                                                                                               cGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGACAAAACTGATATCGCTCAGCa       <  1:1121692/150‑1 (MQ=255)                                                                                                                                                gATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGACAAAACTGATATCGCTCAGCAc      >  1:1718091/1‑150 (MQ=255)                                                                                                                                                    tcCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGACAAAACTGATATCGCGCAGCACTTCa  >  1:1240352/1‑150 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GCCGCGGCGGCTTCGATGTCTGCGCGCGGCGCGCCGGCCAGATCGCCATAAGCGATGTTGTTGGCCACGGTGTCGTTGAACAGGGTGACATGCTGGGTGACTTGCGAAACATGGCGACGCAGGTTACGCAGGCGATAGTGCTCGATCTCCACGCCATCGAGCAGGATCTGCCCCTTGTCGTGGTGATAGAAGCGCGGGATCAGCGCCGCCAGGGTGGACTTGCCACTGCCGGAGCGGCCGACCAGGGCGATCATCTGCCCGGGCTCGGCGACAAAACTGATATCGCTCAGCACTTCA  >  NC_002947/5616109‑5616405

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.