New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3833927 =86 (1.150)9 (0.130) 8/240 NT 10.8% coding (549/2178 nt) vgrG‑II type VI secretion system protein
?NC_002947 3833958 = 68 (0.960)coding (580/2178 nt) vgrG‑II type VI secretion system protein

AATTTTGCGTGCAGGCCGGTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGCGTTACAGCGAACAGGTTCGAACAGCGC  >  NC_002947/3833809‑3834105
                                                                                                                                                        |                                                                                                                                                    
agcgccgcaggcaaggcctggcctgatcgccgcctccaacggatcggtacagcacctgatcggggcccacgtcgtcattgtgaaacccttcatcctcatcatcggtcttgatggccccCCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCggg                                                                                                                                                      >  1:1409536‑M1/119‑150 (MQ=255)
aaTTTTGCGTGCAGGCCGGTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCggg                                                                                                                                                      <  2:11640/150‑1 (MQ=255)
     tGCGTGCAGGCCGGTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGcc                                                                                                                                                 <  1:893725/150‑1 (MQ=255)
      gCGTGCAGGCCGGTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCa                                                                                                                                                <  2:516815/150‑1 (MQ=255)
        gTGCAGGCCGGTGAAACAGACCTCGACTTCATGGTCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATc                                                                                                                                              >  1:121728/1‑150 (MQ=255)
          gCAGGCCGGTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCaa                                                                                                                                            <  1:1487630/150‑1 (MQ=255)
          gCAGGCCGGTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCaa                                                                                                                                            <  1:1302095/150‑1 (MQ=255)
          gCAGGCCGGTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCaa                                                                                                                                            <  2:142760/150‑1 (MQ=255)
            aGGCCGGTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGa                                                                                                                                          <  1:1851531/150‑1 (MQ=255)
             ggCCGGTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGAc                                                                                                                                         <  1:1103540/150‑1 (MQ=255)
             ggCCGGTGAAACAGACCTCGACTTCAGGGCCCGCCTGGCCGCCGAGGAAGGCAGTGTCTCCCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCAATGCCAGGCTG‑‑CGTGCGCGGGGCCAGATCAGCCGGGGGGCCATCAAGAc                                                                                                                                         <  1:1807346/150‑1 (MQ=255)
                aggcctggcctgatcgccgcctccaacggatcggtacagcacctgatcggggcccacgtcgtcattgtgaaacccttcatcctcatcatcggtcttgatggccccccggctgctggcgctgggccagatcagccggGGGGCCATCAAGAc                                                                                                                                         <  1:1754905‑M2/14‑1 (MQ=255)
                 ggTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCgat                                                                                                                                     <  1:157984/150‑1 (MQ=255)
                  gTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCggggg                                                                                                                                                    >  1:745773/1‑134 (MQ=255)
                  gTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCggggg                                                                                                                                                    <  2:745773/134‑1 (MQ=255)
                  gTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCgatg                                                                                                                                    >  1:1906957/1‑150 (MQ=255)
                     aaaCAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGatgatg                                                                                                                                 <  1:667522/150‑1 (MQ=255)
                      aaCAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGAtgatga                                                                                                                                <  1:537415/150‑1 (MQ=255)
                      aaCAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGAtgatga                                                                                                                                <  1:1735334/150‑1 (MQ=255)
                       aCAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAg                                                                                                                               >  1:1759493/1‑150 (MQ=255)
                       aCAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAg                                                                                                                               <  1:522919/150‑1 (MQ=255)
                         aGACCTCGACTTCATGGCCCGCCTGGAAGCCGCCTACGGCATGGGCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGa                                                                                                                             <  2:152238/150‑1 (MQ=255)
                            ccTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGAc                                                                                                                                         >  2:252041/1‑135 (MQ=255)
                            ccTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGAc                                                                                                                                         <  1:252041/135‑1 (MQ=255)
                             cTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGaa                                                                                                                         >  1:652595/1‑150 (MQ=255)
                             cTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGaa                                                                                                                         >  1:1238907/1‑150 (MQ=255)
                              tCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCggg                                                                                                                                                      >  2:1879506/1‑120 (MQ=255)
                              tCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCggg                                                                                                                                                      <  1:1879506/120‑1 (MQ=255)
                                 aCTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGt                                                                                                                     <  1:1201149/150‑1 (MQ=255)
                                     cATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCa                                                                                                                                                >  1:1015761/1‑119 (MQ=255)
                                     cATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCAGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCa                                                                                                                                                <  2:1015761/119‑1 (MQ=255)
                                          cccGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATg                                                                                                            >  2:324820/1‑150 (MQ=255)
                                          cccGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATg                                                                                                            >  1:230863/1‑150 (MQ=255)
                                                 ggCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGt                                                                                                     <  2:733067/150‑1 (MQ=255)
                                                   ccgccgAGGAAGGCATTGTCTACCGCTTCGACCTCTCGCCGAAACAGCACTTGTTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGttg                                                                                                   <  2:641100/150‑3 (MQ=255)
                                                       cacctgatcggggcccacgtcgtcattgtgaaacccttcatcctcatcatcggtcttgatggccccccggctgctggcgctgggccagatcagccggGGGGCCAt                                                                                                                                               <  1:262022‑M2/8‑1 (MQ=255)
                                                       cacctgatcggggcccacgtcgtcattgtgaaacccttcatcctcatcatcggtcttgatggccccccggctgctggcgctgggccagatcagccggGGGGCCAt                                                                                                                                               >  2:262022‑M2/98‑105 (MQ=255)
                                                              ggCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAAt                                                                                                             >  2:100548/1‑129 (MQ=255)
                                                              ggCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAAt                                                                                                             <  1:100548/129‑1 (MQ=255)
                                                               gCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGCGTGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAgg                                                                                      >  1:1259549/1‑150 (MQ=255)
                                                                cATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGt                                                                                     >  1:1314430/1‑150 (MQ=255)
                                                                 aTTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTg                                                                                    >  1:400821/1‑150 (MQ=255)
                                                                 aTTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTg                                                                                    >  2:511693/1‑150 (MQ=255)
                                                                   tGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCACATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCt                                                                                  <  2:1314430/150‑1 (MQ=255)
                                                                     tCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAg                                                                                                                               <  1:82378/104‑1 (MQ=255)
                                                                     tCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAg                                                                                                                               >  2:82378/1‑104 (MQ=255)
                                                                      cTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGTCCGGCTT‑‑GTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTa                                                                               <  2:347631/150‑1 (MQ=255)
                                                                       tACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTAc                                                                              >  2:1468554/1‑150 (MQ=255)
                                                                        aCCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTAcc                                                                             <  1:511693/150‑1 (MQ=255)
                                                                            cTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGa                                                                                                                                          <  1:1396056/86‑1 (MQ=255)
                                                                            cTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGa                                                                                                                                          >  2:1396056/1‑86 (MQ=255)
                                                                                gACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGtt                                                                     <  2:400821/150‑1 (MQ=255)
                                                                                gACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCAATCCCtt                                                                     <  2:652595/150‑1 (MQ=255)
                                                                                 aCCACACGCCGAAACAGCACTTGCTAATCATCACTGAGTGGACG‑‑TCATGAAGATTTCAGATCAGCCGGGGTGCCAGCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTg                                                                    >  1:1279497/1‑150 (MQ=255)
                                                                                 aCCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTg                                                                    <  2:1238907/150‑1 (MQ=255)
                                                                                 aCCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGACGATGAATGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTg                                                                    <  1:234531/150‑1 (MQ=255)
                                                                                   cacaCGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCAATCCGGTGCTGTACCGATCCGTTGGa                                                                  <  2:967404/150‑1 (MQ=255)
                                                                                     cacGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAgg                                                                <  2:230863/150‑1 (MQ=255)
                                                                                         ccGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAggcggc                                                            <  2:121728/150‑1 (MQ=255)
                                                                                           gAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGa                                                          <  2:453322/150‑1 (MQ=255)
                                                                                            aaaCAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGAt                                                         >  1:1370724/1‑150 (MQ=255)
                                                                                             aaCAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATc                                                        <  1:111716/150‑1 (MQ=255)
                                                                                                 gCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATcaggc                                                    >  2:349817/1‑150 (MQ=255)
                                                                                                   aCTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATcaggcca                                                  >  2:1523690/1‑150 (MQ=255)
                                                                                                    ctggCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATcaggccag                                                 >  1:79439/4‑150 (MQ=255)
                                                                                                     ttGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGAt                                                                          <  1:837926/124‑1 (MQ=255)
                                                                                                     ttGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGAt                                                                          >  2:837926/1‑124 (MQ=255)
                                                                                                        gtcttgatggccccCCGGCTGATCTGGCCCAGCGCCAG‑‑CAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCt                                             <  1:1754905‑M1/136‑1 (MQ=255)
                                                                                                         tAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGAGCCGTTGGAGGCGGCGATcagaccagacatt                                            >  2:869544/1‑145 (MQ=255)
                                                                                                           atcatcACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGc                                          <  1:349817/150‑1 (MQ=255)
                                                                                                             catcaCTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCt                                        >  1:1141679/1‑150 (MQ=255)
                                                                                                              atggccccCCGGCTGATCTGGCCCAGCGCCAG‑‑CAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTg                                                                                    <  1:262022‑M1/97‑1 (MQ=255)
                                                                                                              atggccccCCGGCTGATCTGGCCCAGCGCCAG‑‑CAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTg                                                                                    >  2:262022‑M1/9‑105 (MQ=255)
                                                                                                              atcaCTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTg                                       >  1:747766/1‑150 (MQ=255)
                                                                                                                 aCTGACCGGCTG‑‑CTGGCGCTGGGCAAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTgcgg                                    >  1:258475/1‑150 (MQ=255)
                                                                                                                   tGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGAGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGTAGGCGGCGATCTGGCCAGGCCTTGCCTgcggcg                                  >  2:780651/1‑150 (MQ=255)
                                                                                                                        cccggctgatctggcccagcgccagcagccggGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCt                                >  1:1409536‑M2/33‑150 (MQ=255)
                                                                                                                        GGCTG‑‑CGGGCGCTGGGCCCGCTCCGCCGCGGGGACAACAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGc                             >  2:1259549‑M1/1‑150 (MQ=255)
                                                                                                                         ccggctgatctggcccagcgccagcagccggGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCtt                               >  1:103367‑M2/32‑150 (MQ=255)
                                                                                                                         ccggctgatctggcccagcgccagcagccggGGGGCCATCAAGACCGATGATGAGGATGAAGAGATTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGAGGAGATCAAGCCAGGCCTTACCTGCGGTGCtt                               >  2:164244‑M2/32‑150 (MQ=255)
                                                                                                                         GCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTg                                                                    >  2:1251979‑M1/1‑110 (MQ=255)
                                                                                                                         GCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTg                                                                    <  1:1251979‑M1/110‑1 (MQ=255)
                                                                                                                           TG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCgcttgagca                          >  2:767138‑M1/1‑146 (MQ=255)
                                                                                                                            gctgatctggcccagcgccagcagccggTGGGCCATCAAGACCGATGATGAGGATGAAGGGtt                                                                                                                    >  2:1363132‑M2/29‑63 (MQ=255)
                                                                                                                            gctgatctggcccagcgccagcagccggTGGGCCATCAAGACCGATGATGAGGATGAAGGGtt                                                                                                                    <  1:1363132‑M2/35‑1 (MQ=255)
                                                                                                                                      cccagcgccagcagccggGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGCGTTACAGCGaa                  <  2:103367‑M2/132‑1 (MQ=255)
                                                                                                                                           ccAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGa                                                                           >  2:327587/1‑88 (MQ=255)
                                                                                                                                           ccAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGa                                                                           <  1:327587/88‑1 (MQ=255)
                                                                                                                                           ccAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTg                              <  1:1787280/133‑1 (MQ=255)
                                                                                                                                           ccAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTg                              >  2:1787280/1‑133 (MQ=255)
                                                                                                                                            cAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGCGTTACAGCGAACAGGtt            >  1:1303402/1‑150 (MQ=255)
                                                                                                                                             aGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGCGTTACAGCGAACAGGTTc           <  1:1523690/150‑1 (MQ=255)
                                                                                                                                                tCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCATCGGTGATTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGCGTTACAGCGAACAGGTTCGaa        <  1:1468554/150‑1 (MQ=255)
                                                                                                                                                tCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGCGTTACAGCGAACAGGTTCGaa        <  2:1303402/150‑1 (MQ=255)
                                                                                                                                                  agccggGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGTTCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCTAGGCCTTGCCTGCGGCGCTTGCGTTACAGCGAACAGGTTCGAACa      <  1:899653‑M2/144‑1 (MQ=255)
                                                                                                                                                   gccggGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGCGTTACAGCGAACAGGTTCGAACAg     >  2:917808‑M2/6‑150 (MQ=255)
                                                                                                                                                   gccggGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGCGTCCCGGGGAACAGGTTCGAACAg     >  2:901862‑M2/6‑150 (MQ=255)
                                                                                                                                                      ggGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGCGTTACAGCGAACAGGTTCGAACAgcgc  >  1:658090‑M2/3‑150 (MQ=255)
                                                                                                                                                        |                                                                                                                                                    
AATTTTGCGTGCAGGCCGGTGAAACAGACCTCGACTTCATGGCCCGCCTGGCCGCCGAGGAAGGCATTGTCTACCGCTTCGACCACACGCCGAAACAGCACTTGCTAATCATCACTGACCGGCTG‑‑CTGGCGCTGGGCCAGATCAGCCGGGGGGCCATCAAGACCGATGATGAGGATGAAGGGTTTCACAATGACGACGTGGGCCCCGATCAGGTGCTGTACCGATCCGTTGGAGGCGGCGATCAGGCCAGGCCTTGCCTGCGGCGCTTGCGTTACAGCGAACAGGTTCGAACAGCGC  >  NC_002947/3833809‑3834105

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.