New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5453186	3 (0.040)	8 (0.170) +CTTTTTCAAAATGTCAGCGTCGCTGCGGAACTGAAGCCGTACACCTCA	12/158	NT	30.7%	intergenic (+151/‑204)	lnt/PP_4791	apolipoprotein N‑acyltransferase/transposase
	?	NC_002947	5545674 =	55 (0.740)					intergenic (‑766/+111)	rpsF/rlmB	30S ribosomal protein S6/23S rRNA (guanosine(2251)‑2'‑O)‑methyltransferase RlmB

TTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAAC  >  NC_002947/5545571‑5545821                                                                                                         |                                                                                                                                                    ttGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAAGGCTTTTGTAGATATCGATGACAG‑CCCGATATCGTCGACATACTAATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTa                                                                                                       >  1:896079/1‑150 (MQ=11)    ggAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGCTCT‑TACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAg                                                                                                    >  1:595710/1‑150 (MQ=18)    ggAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAg                                                                                                    <  2:1115718/150‑1 (MQ=33)     gAACCATAGCAAAGTATTCGGCGTCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCATATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAgg                                                                                                   <  2:676159/150‑1 (MQ=21)      aaCCATAGCAAAGTGTTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAggg                                                                                                  >  1:1499368/1‑150 (MQ=25)         cATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGAAAGGGCTGGGTGATCTCCTACAGGGGaa                                                                                               >  1:1449137/1‑150 (MQ=38)           tAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACg                                                                                             >  1:736871/1‑150 (MQ=39)            aGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGAGGACCGc                                                                                            >  2:1434156/1‑150 (MQ=25)                aaGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATc                                                                                        <  2:1812275/150‑1 (MQ=255)                   tATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCTCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAATGGCTGGGTGATCTCCTACAGGGGAACGCAATCAcc                                                                                     <  1:151974/150‑1 (MQ=255)                    aTTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCAccc                                                                                    <  2:1901702/150‑1 (MQ=255)                       cggcggCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGt                                                                                 <  1:1230445/150‑1 (MQ=255)                        ggcggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTa                                                                                <  2:829043/150‑1 (MQ=255)                        ggcggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTa                                                                                <  2:540290/150‑1 (MQ=255)                        ggcggcTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTa                                                                                <  2:244189/150‑1 (MQ=255)                        ggcggcTGACCTACCCGGATCACTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTTCAGGGGAACGCAATCACCCTGTa                                                                                <  2:952355/150‑1 (MQ=255)                         ggcggttggcccggtagggccagccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcaTGTTTGCTGCGCGACAGCGCAGCCCGGaa                                                                                                                         >  1:1588062‑M2/81‑109 (MQ=255)                         ggcggttggcccggtagggccagccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcaTGTTTGCTGCGCGACAGCGCAGCCCGGaa                                                                                                                         <  2:1588062‑M2/29‑1 (MQ=255)                          gcggttggcccggtagggccagccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcaTGTTTGCt                                                                                                                                              >  2:650958‑M2/80‑87 (MQ=255)                          gcggttggcccggtagggccagccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcaTGTTTGCt                                                                                                                                              <  1:650958‑M2/8‑1 (MQ=255)                            ggttggcccggtagggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcaTGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTg                                                                                                                   <  2:102450‑M2/35‑1 (MQ=255)                            ggttggcccggtagggccaaccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcaTGTTTGCTGCGCGACAGCGCAGCCCGGAAGGGCTg                                                                                                                   >  1:102450‑M2/78‑112 (MQ=255)                            gcTGACCTACCCGGATCAGTCGGCGAATGCTTTAATTTGTCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAg                                                                            >  1:151574/1‑150 (MQ=17)                             gttggcccggtagggccagccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcaTGTTTGCTGCGCGACAGCGCAGCCCGGAAgg                                                                                                                       >  1:1433341‑M2/77‑107 (MQ=255)                             gttggcccggtagggccagccgccttttctttttcaaaatgtcagcgtcgctgcggaactgaagccgtacacctcaTGTTTGCTGCGCGACAGCGCAGCCCGGAAgg                                                                                                                       <  2:1433341‑M2/31‑1 (MQ=255)                               gACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGAAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCgg                                                                         <  2:1449137/150‑1 (MQ=255)                                              gTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAaga                                                          >  1:1394438/1‑150 (MQ=255)                                               tCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCAccc                                                                                    <  2:674295/123‑1 (MQ=255)                                               tCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCAccc                                                                                    >  1:674295/1‑123 (MQ=255)                                                cGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAgg                                                        <  2:283852/150‑1 (MQ=255)                                                 ggCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGc                                                       <  2:1724612/150‑1 (MQ=255)                                                   ccaaTCCTTTTCTAGATCTCGATGTCATTGCAGATTT‑TACTTCATGCGCATCCTGTTTGCTGTGCGACACCTCAGCCCTGAATGGCTGGGTGTTCTCCTACAGTAGAACGCAATCACCCTTTAGGAGCTGGTTCACCCGCTAAGAGGcct                                                     <  2:896079/148‑2 (MQ=18)                                                   cGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCg                                                     <  2:435051/150‑1 (MQ=255)                                                        gCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGTTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACa                                                <  2:635710/150‑1 (MQ=255)                                                         cTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAg                                               >  1:964687/1‑150 (MQ=255)                                                          ttttCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCGTCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGaa                                                            >  2:1263266/1‑136 (MQ=255)                                                          ttttCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGaa                                                            <  1:1263266/136‑1 (MQ=255)                                                          ttttCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGaa                                                  >  2:255456/1‑146 (MQ=255)                                                          ttttCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGaa                                                  <  1:255456/146‑1 (MQ=255)                                                           tttCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGc                                             <  1:1458664/150‑1 (MQ=255)                                                           tttCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGc                                             <  1:1457671/150‑1 (MQ=255)                                                               tAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTgag                                         >  1:1309648/1‑150 (MQ=255)                                                               tAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTgag                                         >  2:1146843/1‑150 (MQ=255)                                                               tAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTgag                                         >  1:1486184/1‑150 (MQ=255)                                                                     tcGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAg                                   >  1:1693789/1‑150 (MQ=255)                                                                     tcGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAg                                   >  1:1736492/1‑150 (MQ=255)                                                                       gATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAgcg                                 >  2:1827635/1‑150 (MQ=255)                                                                       gATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAgcg                                 >  1:145939/1‑150 (MQ=255)                                                                       gATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAgcg                                 >  2:115380/1‑150 (MQ=255)                                                                       gATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAgcg                                 >  1:252931/1‑150 (MQ=255)                                                                          gTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCtt                              <  2:1309648/150‑1 (MQ=255)                                                                               tGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAgg                                                                                                   >  2:1717274/1‑76 (MQ=39)                                                                               tGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAgg                                                                                                   <  1:1717274/76‑1 (MQ=39)                                                                                 cAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGc                       <  1:628663/150‑1 (MQ=255)                                                                                  aGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGcc                      >  1:1000191/1‑150 (MQ=255)                                                                                    aTCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTCGACCTGCCGc                    >  2:1080751/1‑150 (MQ=255)                                                                                    aTCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGAAAATCACTCACCCTGTAGGATTTTGTTCTGCCGGGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGc                    <  1:233436/150‑1 (MQ=21)                                                                                            gTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCa             <  2:1486184/150‑1 (MQ=255)                                                                                            gTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGCTTCACCCGCGAAGAGGCCGGAACAGGCCGCGAGTCTGCTCTTGACCTGCCGCTgcctca             <  2:850743/150‑6 (MQ=37)                                                                                             tCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCAc            <  1:334472/150‑1 (MQ=255)                                                                                              cATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACg           >  1:681071/1‑150 (MQ=255)                                                                                                tGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGc         >  2:195010/1‑150 (MQ=255)                                                                                                   gcATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTc      <  2:1693789/150‑1 (MQ=255)                                                                                                     aTCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGACCGCAATCACGCGCTAGGAGGGGGGTTATCCAGAAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGa    >  1:611106/1‑150 (MQ=25)                                                                                                      tCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGaa   <  1:92862/150‑1 (MQ=255)                                                                                                       ccTGTTTGCTGTGCGACAGCGCCGATTCTAATGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAAc  <  1:1434156/150‑1 (MQ=38)                                                                                                       ccTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATTACCCTGTAGGAGCGGGTTCCCCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAAc  <  2:522706/150‑1 (MQ=255)                                                                                                         |                                                                                                                                                    TTGGGAACCATAGCAAAGTATTCGGCGGCTGACCTACCCGGATCAGTCGGCGAATGCTTTTCTAGATCTCGATGTCAGTGCAGATCT‑GACGTCATGCGCATCCTGTTTGCTGTGCGACAGCGCAGCCCGGAAGGGCTGGGTGATCTCCTACAGGGGAACGCAATCACCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCGGAACAGGCTGAGAGTCAGCGCTTGACCTGCCGCTGACGCACGGCTTCGAAC  >  NC_002947/5545571‑5545821

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.