New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5682433 =	68 (0.910)	7 (0.100)	7/238	NT	9.9%	coding (4516/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver
	?	NC_002947	5682468 =	64 (0.920)					coding (4481/4941 nt)	PP_4988	signal transduction histidine kinase CheA/CheY‑like receiver

CAGGCGGCTGGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCTGGATGGCGAACGACTGCTC  >  NC_002947/5682320‑5682616                                                                                                                                                      |                                                                                                                                                     cccagccgcgagatcgtggtgaaaagcctggggccgcagtttgccgcggttgccgggttatcgggggcgacactgctgggcgatggccgggtggtgctgattcttgacctgccGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCcag                                                                                                                                                     >  1:1036594‑M1/114‑150 (MQ=255)   ggcggcTGGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCcagca                                                                                                                                                   <  1:1167765/150‑1 (MQ=255)   ggcggcTGGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCcagca                                                                                                                                                   <  1:1167156/150‑1 (MQ=255)    gcggcTGGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCcagcag                                                                                                                                                  <  2:1817421/150‑1 (MQ=255)       gcTGGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTc                                                                                                                                               >  1:1299759/1‑150 (MQ=255)         tGGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCaa                                                                                                                                             >  1:202994/1‑150 (MQ=255)            agatcgtggtgaaaagcctggggccgcagtttgccgcggttgccgggttatcgggggcgacactgctgggcgatggccgggtggtgctgattcttgacctgctgggccagccgtcgctgctggccgcgcagctggcccAGCAGGTCAAGa                                                                                                                                           <  1:1635259‑M2/12‑1 (MQ=255)                cTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAg                                                                                                                                      <  1:624047/150‑1 (MQ=255)                  tGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGca                                                                                                                                    <  1:1217956/150‑1 (MQ=255)                     gTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGcacca                                                                                                                                 >  1:647033/1‑150 (MQ=255)                     gTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGcacca                                                                                                                                 >  1:1923142/1‑150 (MQ=255)                      tACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTGCCGCCACCAGGCAAGCGGACAAGCTGCTGGGGCTTTTGTCT‑CAGCTGGCCCAGCAGGTCAAGAATCAGcaccac                                                                                                                                >  1:425218/1‑150 (MQ=255)                          gTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCCCCACCCgg                                                                                                                            >  2:1783603/1‑150 (MQ=255)                           ttACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGc                                                                                                                           >  1:320400/1‑150 (MQ=255)                                 aaTCGCCCACCCCTGTCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGc                                                                                                                     <  2:347204/150‑1 (MQ=255)                                      tCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCcagc                                                                                                                >  2:1271446/1‑150 (MQ=255)                                      tCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCcagc                                                                                                                >  2:584201/1‑150 (MQ=255)                                        caccaccaTCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCcagcag                                                                                                              >  1:38668/1‑150 (MQ=255)                                           caccaTCACCAGCAAGGCATGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAgtgt                                                                                                           <  1:241799/150‑1 (MQ=255)                                            accaTCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTc                                                                                                          <  1:90332/150‑1 (MQ=255)                                              caTCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGc                                                                                                        >  2:1466690/1‑150 (MQ=255)                                                tCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTAGCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGccc                                                                                                      >  1:987358/1‑150 (MQ=255)                                                tCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGccc                                                                                                      <  1:1045821/150‑1 (MQ=255)                                                tCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGccc                                                                                                      >  2:1007248/1‑150 (MQ=255)                                                tCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGccc                                                                                                      >  2:1885006/1‑150 (MQ=255)                                                 cACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGcccc                                                                                                     <  1:1885006/150‑1 (MQ=255)                                                  aCCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCa                                                                                                                                       <  2:1361932/115‑1 (MQ=255)                                                  aCCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCa                                                                                                                                       >  1:1361932/1‑115 (MQ=255)                                                  aCCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGccc                                                                                                                   <  1:1644146/135‑1 (MQ=255)                                                  aCCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGccc                                                                                                                   >  2:1644146/1‑135 (MQ=255)                                                    cAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGACTCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGa                                                                                                  >  2:1178154/1‑150 (MQ=255)                                                        aaGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATaaa                                                                                              >  2:232863/1‑149 (MQ=255)                                                         aGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAAcc                                                                                             <  1:584201/150‑1 (MQ=255)                                                           gCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCg                                                                                           >  2:1551939/1‑150 (MQ=255)                                                             aCGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGc                                                                                         >  2:150145/1‑150 (MQ=255)                                                                     gcgcCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCCCgg                                                                                 <  2:320400/150‑1 (MQ=255)                                                                       gcCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCa                                                                               >  2:1722544/1‑150 (MQ=255)                                                                         cGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCaaa                                                                             <  1:1135076/150‑1 (MQ=255)                                                                            gCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTg                                                                          <  1:362098/150‑1 (MQ=255)                                                                              cAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCg                                                                        <  2:1299759/150‑1 (MQ=255)                                                                              cAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCg                                                                        <  1:1394986/150‑1 (MQ=255)                                                                                   aaCTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGcccc                                                                   >  2:1651236/1‑150 (MQ=255)                                                                                     cTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGACAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGCTAACCCGGCAACCGCGGCAAACTGCAGCCCCAg                                                                 >  1:1658344/1‑150 (MQ=255)                                                                                      tGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAgg                                                                <  2:1923142/150‑1 (MQ=255)                                                                                      tGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAgg                                                                <  2:647033/150‑1 (MQ=255)                                                                                        gCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCt                                                              >  1:927491/1‑150 (MQ=255)                                                                                          gTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCttt                                                            >  1:1274452/1‑150 (MQ=255)                                                                                             ggCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTca                                                         >  2:748232/1‑150 (MQ=255)                                                                                              gCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGcc                                                                                                       >  1:1292988/1‑103 (MQ=255)                                                                                              gCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGcc                                                                                                       <  2:1292988/103‑1 (MQ=255)                                                                                                   cGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATaa                                                                                               >  1:973022/1‑106 (MQ=255)                                                                                                   cGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATaa                                                                                               <  2:973022/106‑1 (MQ=255)                                                                                                   cGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGa                                                   >  1:1675093/1‑150 (MQ=255)                                                                                                      tcttgacctgctGGGCCAGCTG‑CGCGGCCAGCAGCGACGGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGAtct                                                <  1:1635259‑M1/138‑1 (MQ=255)                                                                                                      caccaGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGAtct                                                >  2:1715191/1‑150 (MQ=255)                                                                                                          aGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTcgcg                                            <  1:748232/150‑1 (MQ=255)                                                                                                           ggCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCGCCACGACCTCGCgg                                           <  2:594763/150‑1 (MQ=255)                                                                                                           ggCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCgg                                           <  2:202994/150‑1 (MQ=255)                                                                                                              aaGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTg                                        <  2:1274452/150‑1 (MQ=255)                                                                                                                 ctgggccagctgcgcggccagcagcgacggctggcccGGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTggg                                      >  1:1036594‑M2/38‑150 (MQ=255)                                                                                                                  GGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTcacc                                                       <  2:1147680‑M1/131‑1 (MQ=255)                                                                                                                  GGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTcacc                                                       >  1:1147680‑M1/1‑131 (MQ=255)                                                                                                                     gccagctgcgcggccagcagcgacggctggcccAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCtttt                                                           <  2:1354276‑M2/92‑1 (MQ=255)                                                                                                                     gccagctgcgcggccagcagcgacggctggcccAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCtttt                                                           >  1:1354276‑M2/34‑125 (MQ=255)                                                                                                                     cccgCCGTCCCTGTTGGCCGCC‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCAGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACa                                 <  2:987358/147‑1 (MQ=255)                                                                                                                      ccagctgcgcggccagcagcgacggctggcccAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTg                                        >  1:1144003‑M2/33‑143 (MQ=255)                                                                                                                      ccagctgcgcggccagcagcgacggctggcccAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTg                                        <  2:1144003‑M2/111‑1 (MQ=255)                                                                                                                       AGCCGTCGCTGCTGGCCGCG‑CAACTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAgg                               >  2:506356‑M1/1‑150 (MQ=255)                                                                                                                          cGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCgg                                                                                 >  1:819236/1‑97 (MQ=255)                                                                                                                          cGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCgg                                                                                 <  2:819236/97‑1 (MQ=255)                                                                                                                           gTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATc                                                                                                                                        >  2:1915212/1‑41 (MQ=255)                                                                                                                           gTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATc                                                                                                                                        <  1:1915212/41‑1 (MQ=255)                                                                                                                              gctgctGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCAAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCgg                        >  1:1838425/1‑150 (MQ=255)                                                                                                                                 gctgGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCt                     <  2:604983/150‑1 (MQ=255)                                                                                                                                 gctgGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATAACCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCt                     <  1:1535223/150‑1 (MQ=255)                                                                                                                                 cctgGCCTCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCt                     <  1:1764234/149‑1 (MQ=255)                                                                                                                                    ggCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCTGGa                  <  2:425218/150‑1 (MQ=255)                                                                                                                                    ggCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAAACCGGCAACCGCGGAAAACCGCGTCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCTGGa                  <  1:232863/150‑1 (MQ=255)                                                                                                                                     gcagcgacggctggcccAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCTGGa                  <  2:1635259‑M2/133‑1 (MQ=255)                                                                                                                                                tggcccAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCTGGATGGCGAACGAc       <  1:1551939‑M2/144‑1 (MQ=255)                                                                                                                                                  gcccAGCAGGTCAAGAATCAGCCCCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAAcc                                                                                     <  2:979540‑M2/66‑1 (MQ=255)                                                                                                                                                  gcccAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAAcc                                                                                     >  1:979540‑M2/5‑70 (MQ=255)                                                                                                                                                    ccAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCCAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCTGGATGGCGAACGACTGCt   >  2:197336‑M2/3‑150 (MQ=255)                                                                                                                                                    ccAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCTGGATGGCGAACGACTGCt   >  2:295432‑M2/3‑150 (MQ=255)                                                                                                                                                     cAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCTGGATGGCGAACGACTGCTc  >  1:1494126‑M2/2‑150 (MQ=255)                                                                                                                                                     cAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGCCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCTGGATGGCGAACGCCTGCTc  >  1:32850‑M2/2‑150 (MQ=255)                                                                                                                                                      |                                                                                                                                                     CAGGCGGCTGGTTACCTTGCGTACGGTTACCGAATCGTCCACCACCATCACCAGCAAGGCACGGCGCGGCGCCGGGCCAAGCAACTGGCGTTGGCTACCGCCACCAGGCAAGCGGGCCAGCCGTCGCTGCTGGCCGCG‑CAGCTGGCCCAGCAGGTCAAGAATCAGCACCACCCGGCCATCGCCCAGCAGTGTCGCCCCCGATAACCCGGCAACCGCGGCAAACTGCGGCCCCAGGCTTTTCACCACGATCTCGCGGCTGGGCGACAGGCTGTCGGCCTGGATGGCGAACGACTGCTC  >  NC_002947/5682320‑5682616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.