New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5985540 =	54 (0.720)	5 (0.070)	4/236	NT	9.3%	coding (112/405 nt)	PP_5244	AraC family transcriptional regulator
	?	NC_002947	5985574 =	47 (0.680)					coding (78/405 nt)	PP_5244	AraC family transcriptional regulator

TGCGGCGAAAGGCCGGTGTTGACTTTGAACGCGCGGGAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAATTGTTGTTAATTGTGCGCTGCTGGCCCTGG  >  NC_002947/5985425‑5985708                                                                                                                                                      |                                                                                                                                       tGCGGCGAAAGGCCGGTGTTGACTTTGAACGCGCGGGAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCgggg                                                                                                                                        >  1:437961/1‑150 (MQ=255)   aacaacaattcaggtttggctcaggacttcgtcatgtgccgggggcgagactttctgcattgaacaggagagtcgccatgtaccctgggacgcccgaagcgccgctgcaaaccCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGt                                                                                                                                      <  1:1508541‑M1/37‑1 (MQ=255)     gcgAAAGGCCGGTGTTGACTTTGAACGCGCGGGAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGttt                                                                                                                                    <  1:293496/150‑1 (MQ=255)     gcgAAAGGCCGGTGTTGACTTTGAACGCGCGGGAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGttt                                                                                                                                    <  1:1526026/150‑1 (MQ=255)     gcgAAAGGCCGGTGTTGACTGTGAACGCCCTGGAAAAATGGCTTCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTAGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGttt                                                                                                                                    <  1:293426/150‑1 (MQ=255)       gAAAGGCCGGTGTTGACTTTGAACGCGCGGGAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGACCTTCGCAGCCGCGCGGGAGTGAGTGCGCCGGGGGTTTgt                                                                                                                                  >  1:679698/1‑149 (MQ=255)        caattcaggtttggctcaggacttcgtcatgtgccgggggcgagactttctgcattgaacaggagagtcgccatgtaccctgggacgcccgaagcgccgctgcaaaccCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGCTTGCa                                                                                                                                 >  2:1508541‑M1/109‑150 (MQ=255)            gCCGGTGTTGACTTTGAACGCGCGGGAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAgcgg                                                                                                                             <  2:290797/150‑1 (MQ=255)              cGGTGTTGACTTTGAACGCGCGGGAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCTGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAgcggcg                                                                                                                           >  1:1759831/1‑150 (MQ=255)                   ttGACTTTGAACGCGCGGGAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCg                                                                                                                      <  2:1674507/150‑1 (MQ=255)                     gACTTTGAACGCGCGGGAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCggg                                                                                                                    >  1:1522133/1‑150 (MQ=255)                              cgcgcgGGAAAGATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAgg                                                                                                           <  1:873913/150‑1 (MQ=255)                                   gggAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACa                                                                                                      >  1:577329/1‑150 (MQ=255)                                    ggAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACAt                                                                                                     >  2:1346991/1‑150 (MQ=255)                                    ggAAAAATGGATGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACAt                                                                                                     <  1:1636525/150‑1 (MQ=255)                                     gAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCATTGGCACGGCGCAGCAGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTGCAAGGGTACATg                                                                                                    >  2:752614/1‑150 (MQ=255)                                               tGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGGCAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCTAGGGTACATGGCGACTCTcc                                                                                          >  2:1659508/1‑150 (MQ=255)                                                gCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCt                                                                                         <  2:565512/150‑1 (MQ=255)                                                   ggTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGtt                                                                                      <  1:952802/150‑1 (MQ=255)                                                    gTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTc                                                                                     >  1:1012491/1‑150 (MQ=255)                                                      aaGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCaa                                                                                   <  2:801531/150‑1 (MQ=255)                                                         gTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGc                                                                                >  2:1612934/1‑150 (MQ=255)                                                         gTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGc                                                                                >  1:551325/1‑150 (MQ=255)                                                          ttGCATACCGCGGCGATCTCGACGGTCCGCTGCGAACTAGGCAGCAGCAGCTCCTGGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCa                                                                               <  2:1647537/150‑1 (MQ=255)                                                              aTACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGTATGGCGCGGGTGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGaaa                                                                           >  1:1059066/1‑150 (MQ=255)                                                              aTACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGaaa                                                                           >  1:137764/1‑150 (MQ=255)                                                              aTACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGaaa                                                                           >  1:1580148/1‑150 (MQ=255)                                                               tACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGc                                                                                                                   <  2:1718905/109‑1 (MQ=255)                                                               tACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGc                                                                                                                   >  1:1718905/1‑109 (MQ=255)                                                                aCCTCGTCGATCTCGATGAACGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGAGCCGGGGGTTTTCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGGCTCTCCTGTTCAATGCAGAAAGt                                                                         <  2:679698/150‑1 (MQ=255)                                                                   gcggcgATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGtctc                                                                      >  1:1140616/1‑150 (MQ=255)                                                                   gcggcgATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGtctc                                                                      >  1:1739558/1‑150 (MQ=255)                                                                    cggcgATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCg                                                                     <  2:1604340/150‑1 (MQ=255)                                                                               atgatCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGcaca                                                          >  2:898872/1‑150 (MQ=255)                                                                                     gACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGa                                                    >  2:1086323/1‑150 (MQ=255)                                                                                      aCAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGaa                                                   <  2:1522133/150‑1 (MQ=255)                                                                                      aCAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGaa                                                   <  2:1140616/150‑1 (MQ=255)                                                                                         aCGGGCCATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTc                                                <  1:558606/150‑1 (MQ=255)                                                                                          cGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTcc                                               >  2:1329582/1‑150 (MQ=255)                                                                                          cGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGAGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTcc                                               <  1:426820/150‑1 (MQ=255)                                                                                           gggCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCt                                              >  1:1197368/1‑150 (MQ=255)                                                                                             gCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGa                                            <  1:1566882/150‑1 (MQ=255)                                                                                                  gCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCaa                                       >  2:486884/1‑150 (MQ=255)                                                                                                         cAGCTGCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACAGGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGaa                                <  1:737546/150‑1 (MQ=255)                                                                                                            tgcaagcccccggcgcactcacgcccgcgcggctgcgccgggGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAAttg                             >  2:1508541‑M2/43‑150 (MQ=255)                                                                                                            cTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCATGAGCCAAACCTGAAttg                             >  1:471425/1‑150 (MQ=255)                                                                                                              ccTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAAttgtt                           <  1:1321917/150‑1 (MQ=255)                                                                                                               cTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAAttgttg                          >  1:490792/1‑150 (MQ=255)                                                                                                               cTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAAttgttg                          >  1:349242/1‑150 (MQ=255)                                                                                                                 acccccggcgcactcacgcccgcgcggctgcgccgggGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAATTgttgtt                        <  1:1508541‑M2/113‑1 (MQ=255)                                                                                                                     ccggcgcactcacgcccgcgcggctgcgccgggGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTg                                                                                        >  2:1769518‑M2/34‑82 (MQ=255)                                                                                                                     ccggcgcactcacgcccgcgcggctgcgccgggGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTg                                                                                        <  1:1769518‑M2/49‑1 (MQ=255)                                                                                                                     ccggcgcactcacgcccgcgcggctgcgccgggGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAATTGTTGTTAAtt                    >  2:1446935‑M2/34‑150 (MQ=255)                                                                                                                       GGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAATTGTTGTTAATtgt                  >  2:577329‑M1/1‑150 (MQ=255)                                                                                                                       GGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGAGCGTCCCAGGGTACCTGGCGCATTTGTGCTTTAATGCAGAAACTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAATTGTTGTTAATtgt                  >  2:1005033‑M1/1‑150 (MQ=255)                                                                                                                          GCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAATTGTTGTTAATTGTgcg               <  2:893186‑M1/150‑1 (MQ=255)                                                                                                                                gcgcgGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAATTGTTGTTAATTGTGCGctgctg         <  2:1759831/150‑1 (MQ=255)                                                                                                                                       cGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAATTGTTGTTAATTGTGCGCTGCTGGCCCTgg  <  2:1317715/150‑1 (MQ=255)                                                                                                                                       cGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAATTGTTGTTAATTGTGCGCTGCTGGCCCTgg  <  2:137764/150‑1 (MQ=255)                                                                                                                                       cGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAATTGTTGTTAATTGTGCGCTGCTGGCCCTgg  <  2:1319112/150‑1 (MQ=255)                                                                                                                                       cGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAATTGTTGTTAATTGTGCGCTGCGGGCCCTgg  <  2:1059066/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                       TGCGGCGAAAGGCCGGTGTTGACTTTGAACGCGCGGGAAAAATGGCTGCGGGTAAGGTTGCATACCGCGGCGATCTCGATGATCGACAACGGGCTATGCAACATCAGCTCCTTGGCCCGGCGCAGCCGCGCGGGCGTGAGTGCGCCGGGGGTTTGCAGCGGCGCTTCGGGCGTCCCAGGGTACATGGCGACTCTCCTGTTCAATGCAGAAAGTCTCGCCCCCGGCACATGACGAAGTCCTGAGCCAAACCTGAATTGTTGTTAATTGTGCGCTGCTGGCCCTGG  >  NC_002947/5985425‑5985708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.