| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6032808 = | 44 (0.590) | 8 (0.140) | 6/188 | NT | 29.9% | intergenic (+16/+120) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein |
| ? | NC_002947 | 6032890 = | 5 (0.090) | intergenic (+98/+38) | dppA‑IV/PP_5284 | dipeptide transport protein/hypothetical protein | |||||
GGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAA > NC_002947/6032741‑6033032 | ggTGAGGCCGTTCGGGCGGCTGGATTTCAGCAAGGTGAAGATGGCCAAGTAAGCCTGTACCGGCCTCTTCGAGGGGAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGaaa < 1:1563331/150‑1 (MQ=38)ggTGAGCCCGTTCGGGCGGCTGGATTTCAGCAACGTGACGGTGACCAATTAAGCTTGTAGCGGCCTCTTCGAGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGaaa < 1:1562786/150‑1 (MQ=38) ggAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTCAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAgg < 1:1364365/149‑1 (MQ=255) gCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGc > 2:1093014/1‑149 (MQ=255) gCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGc < 1:1093014/149‑1 (MQ=255) ggcggcTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGAc < 1:261334/150‑1 (MQ=255) gTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACaa < 1:907670/150‑1 (MQ=255) ccTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCAGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCAc < 2:1090282/150‑1 (MQ=255) cGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCt > 1:1659074/1‑150 (MQ=255) GGTAAACCCGCTTATACAGGGGTAGCGCCCGCCTGGCAGT‑TGAGGATACTCATGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACaa > 2:631360‑M1/1‑150 (MQ=255) CCCGCTCCTACAGGGGTAGCGTCAAC‑TGCCAGGCTGGCGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTc < 2:734092‑M1/150‑1 (MQ=255) CCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTcc < 1:1557860‑M1/150‑1 (MQ=255) CCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTcc < 1:1753974‑M1/150‑1 (MQ=255) CCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTcc < 1:1853273‑M1/150‑1 (MQ=255) ACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCAcc < 1:920278‑M1/150‑1 (MQ=255) aggggtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCAt > 2:281589‑M2/60‑127 (MQ=255) aggggtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCAt < 1:281589‑M2/68‑1 (MQ=255) aggggtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCaa > 1:1041822‑M2/60‑150 (MQ=255) GGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAat < 1:251187‑M1/150‑1 (MQ=255) GTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGAc < 1:1307721‑M1/99‑1 (MQ=255) GTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGAc > 2:1307721‑M1/1‑99 (MQ=255) gtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAgg > 2:1229369‑M2/56‑79 (MQ=255) gtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAgg < 1:1229369‑M2/24‑1 (MQ=255) gtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgat > 1:713791‑M2/56‑150 (MQ=255) gtagcgtcaactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgat > 1:1065915‑M2/56‑150 (MQ=255) TAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGa < 2:1640623‑M1/68‑1 (MQ=255) TAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGa > 1:1640623‑M1/1‑68 (MQ=255) GCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAatgatgat < 1:756777‑M1/150‑1 (MQ=255) caactgccaggctggcgctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGa < 2:1041822‑M2/102‑1 (MQ=255) aGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGAt > 1:56731/1‑150 (MQ=255) gctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCAGCGACGACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACat > 2:1485375‑M2/33‑150 (MQ=255) ctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAgg > 2:511879‑M2/32‑55 (MQ=255) ctacccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAgg < 1:511879‑M2/24‑1 (MQ=255) acccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACatcaa < 2:713791‑M2/121‑1 (MQ=255) ccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCa < 2:1103766‑M2/106‑1 (MQ=255) ccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCa > 1:1103766‑M2/28‑133 (MQ=255) ccctgtaggagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACatcaatc > 2:1394360‑M2/28‑150 (MQ=255) cctgtaggagtgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCAACATCAGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACatcaatca > 1:1057971‑M2/27‑150 (MQ=255) gagcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAg > 2:1286547‑M2/20‑150 (MQ=255) gcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGcc < 2:1065915‑M2/133‑1 (MQ=255) gcgggtttacccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGcc > 1:255577‑M2/18‑150 (MQ=255) tttacccgcgaaGAGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGc > 1:1781020‑M2/13‑150 (MQ=255) ccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTAGTCCCTCAAACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCaa > 1:1680316‑M2/8‑150 (MQ=255) ccgcgaaAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCaa > 1:104218‑M2/8‑150 (MQ=255) | GGTGAGCCCGTTCGGGCGGCTGGATTTCAGCAAGGTGACGGTGACCAAGTAAGCCTGTACCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGTAGCGCCAGCCTGGCAGT‑TGACGCTACCCCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCCGTACTGACCCTATAAGGCTCTCAGTACTCCCTCAGACCACAATCCACCCATGCTCGACCATCGACAACGGCTCCCCATCACCAATGATGATGTGATCCAGCACCCGCACATCAATCAACGCCAGCCCCCGCTTCAA > NC_002947/6032741‑6033032 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |