New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 210283668 (1.210)8 (0.210)
+AATAAAGATCTACAGGTTTCAGTCGAAGTCTGTAAGTCGTT		 8/184 3.6 16.9% noncoding (76/76 nt) PP_t21 tRNA‑Gly
?NC_002947 4632531 = 46 (0.820)intergenic (+90/+69) PP_4096/PP_t59 hypothetical protein/tRNA‑Gly
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2102756‑2102836
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGA  >  NC_002947/4632531‑4632577
                                                                                 |||||||||||||||||||||||||||||||||||||||||                                               
acgacGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAATAAAGATCTACAGGTTTCAGTCGAAGTCTGTAAGTCGTTGAAAAAAGGCCCCGAAGGGCCTTTTTTC                     <  2:614015/145‑1
  gacGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAATAAAGATCTACAGGTTTCAGTCGAAGTCTGTAAGTCGTTGAAAAAAGGCCCCGAAGGGCCTTTTTTCAA                   <  1:1060497/147‑1
                             CACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAATAAAGATCTACAGGTTTCAGTCGAAGTCTGTAAGTCGTTGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGA  >  1:145142/1‑140
                             CACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAATAAAGATCTACAGGTTTCAGTCGAAGTCTGTAAGTCGTTGAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGA  <  2:145142/140‑1
                                GACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAATAAAGATCTACAGGTTTCAGTCGAAGTCTGTAAGTCGTTGAAAAAAGGCCCCGAAGGGCCTTTTTTCAAC                  >  1:976107/1‑121
                                GACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCAAATAAAGATCTACAGGTTTCAGTCGAAGTCTGTAAGTCGTTGAAAAAAGGCCCCGAAGGGCCTTTTTTCAAC                  <  2:976107/121‑1
                                                                    GTTTCCCGCTCCAAATAAAGATCTACAGGTTTCAGTCGAAGTCTGT                                                         <  1:297081/46‑1
                                                                    GTTTCCCGCTCCAAATAAAGATCTACAGGTTTCAGTCGAAGTCTGT                                                         >  2:297081/1‑46
                                                                        CCCGCTCCAAATAAAGATCTACAGGTTTCAGTCGAAGTCTGTAAGTCGTTGAAAAAAGGCCCCGAAGGGCCTTTT                        <  1:1269454/75‑1
                                                                        CCCGCTCCAAATAAAGATCTACAGGTTTCAGTCGAAGTCTGTAAGTCGTTGAAAAAAGGCCCCGAAGGGCCTTTT                        >  2:1269454/1‑75
                                                                                 |||||||||||||||||||||||||||||||||||||||||                                               
CCAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTCGCGAGTTCGAGTCTCGTTTCCCGCTCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2102756‑2102836
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAAAAAAGGCCCCGAAGGGCCTTTTTTCAACGACTTACAGACTTCGA  >  NC_002947/4632531‑4632577

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.