| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 401317 = | 24 (0.630) | 10 (0.290) | 10/244 | 2.5 | 25.4% | coding (900/1059 nt) | PP_0334 | transposase |
| ? | NC_002947 | 401373 = | 37 (1.080) | coding (956/1059 nt) | PP_0334 | transposase | |||||
TCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCT > NC_002947/401169‑401464 | caggggttggagcgcctagcgccccggtggcattacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccTg < 1:616641‑M1/2‑1 (MQ=255) aggggttggagcgcctagcgccccggtggcattacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccTGa < 2:499814‑M1/3‑1 (MQ=255) gggttggagcgcctagcgccccggtggcattacccggttggtcagaggctcatatccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccTGATc > 2:681637‑M1/146‑150 (MQ=255) gggttggagcgcctagcgccccggtggcattacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccTGATc > 2:805260‑M1/146‑150 (MQ=255) gggttggagcgcctagcgccccggtggcattacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccTGATc > 2:709761‑M1/146‑150 (MQ=255) ggagcgcctagcgccccggtggcattacccggttggttaaaggctcatagccgcctccggttttttgttcggtttgggttggtagacctgatcgctctgtaacagggcccagataaaccccagatttctattagccaaccTGATcgccgc < 2:704840‑M1/10‑1 (MQ=255) gagcgcctagcgccccggtggcattacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccTGATCgccgcc < 1:616120‑M1/11‑1 (MQ=255) attacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcct < 2:910469‑M1/1‑1 (MQ=255) attacccggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcct > 1:910469‑M1/118‑118 (MQ=255) cggttggtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccTGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGgcg < 1:815440‑M1/39‑1 (MQ=255) agaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccagaTGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAagga > 1:270923‑M1/106‑150 (MQ=255) tcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccTGATCTCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAaggag < 1:244720‑M1/46‑1 (MQ=255) gtcagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagattccgatcagccagaTGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAaggag > 1:152334‑M1/105‑150 (MQ=255) cagaggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccTGATCTCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAaggagg > 2:244720‑M1/104‑150 (MQ=255) aggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccTGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggcgg > 2:815440‑M1/101‑150 (MQ=255) aggctcatagccgcctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagaaaatccgcagattccgatcagccagaTGATCGCCGCCTCTTGCGCTAGCTATCCCGCCTTGGGCGCAAGGAggcggc > 2:179371‑M1/100‑150 (MQ=255) cctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagaTGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAggctggct > 2:149909‑M1/87‑150 (MQ=255) gttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccTGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc < 1:471517‑M1/48‑1 (MQ=255) gttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagccTGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAggc > 2:471517‑M1/75‑122 (MQ=255) cTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAATGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTgg < 1:247700/150‑1 (MQ=17) cTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTAGCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTgg < 1:421723/150‑1 (MQ=17) tgatgaTCGAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGGAATCTGCGGATTATCTggg > 2:527525/1‑150 (MQ=17) tgatgaTCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTggg < 2:256330/150‑1 (MQ=32) gctgaaCCAGGTCGTTCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGc < 2:768494/148‑1 (MQ=255) gatgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCCAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTg > 2:408777/1‑147 (MQ=17) gatgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTg < 1:408777/147‑1 (MQ=32) gatgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGc < 2:757891/150‑1 (MQ=32) tgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGACGTGGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGccc > 1:803797/1‑150 (MQ=255) taatCCAGGGCGCGCATTCCGTCTTGAGCAAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGccc < 2:172026/148‑1 (MQ=17) taaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcct < 2:440131‑M1/1‑1 (MQ=255) taaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagcct > 1:440131‑M1/59‑59 (MQ=255) gatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCAAGATGATCACCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTTGCTAATCGAAATCTGCGGATTATCTGGGCCCt > 2:379786/1‑150 (MQ=12) tCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCATGt < 2:592199/150‑1 (MQ=17) ccAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGtt > 1:704840/1‑150 (MQ=32) gggCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTAGGCCCTGTTACa > 2:703038/1‑150 (MQ=17) gcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGc > 2:420337/1‑150 (MQ=32) gcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGa > 2:249448/1‑150 (MQ=32) ttGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTAc < 1:366405/150‑1 (MQ=32) aGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCaa < 1:249448/150‑1 (MQ=32) aGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCaa < 1:96753/150‑1 (MQ=32) aGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGAACAGGCTGGCTAATCCAAATCTGCGGATTATCTGGGCACTGATACAGAGCAATCAGGATCACCAACGCACACcg > 1:69011/1‑150 (MQ=11) gCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGTCTATCCCGCTTTGGGCGCAAGGAGACTTCTATCAGGCTGGCGAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACAAACGCAAACcgaa > 1:534655/1‑150 (MQ=11) gCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAACGAGGCGCAGCGTAGGCTGGCTAATCGCAAGCTGCGGCTTATCTGGGCCATGTTCCAGACCGTTCAGGTTTACCAACGCAAACcgaa > 2:647306/1‑150 (MQ=11) cTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaacg > 2:331589/1‑150 (MQ=32) gatgatCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCt > 1:499814/1‑150 (MQ=32) | TCGGTATCGTGCCCGATCAGCACAGCAGCGGAAACAAAATCAGATTGGGCAAGATGAGCAAGCGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCT > NC_002947/401169‑401464 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |