New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 401317 =24 (0.630)10 (0.290) 10/244 2.5 25.4% coding (900/1059 nt) PP_0334 transposase
?NC_002947 401373 = 37 (1.080)coding (956/1059 nt) PP_0334 transposase

CGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTG  >  NC_002947/401231‑401520
                                                                                                                                              |                                                                                                                                                   
cctccggtttttcgttcggtttgcgttggtaaacctgatcgctctgtaacagggcccagataatccgcagatttcgattagccagaTGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAggctggct                                                                                                                                              >  2:149909‑M1/87‑150 (MQ=255)
                        cTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAATGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTgg                                                                                                                      <  1:247700/150‑1 (MQ=17)
                        cTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTAGCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTgg                                                                                                                      <  1:421723/150‑1 (MQ=17)
                         tgatgaTCGAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGGAATCTGCGGATTATCTggg                                                                                                                     >  2:527525/1‑150 (MQ=17)
                         tgatgaTCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTggg                                                                                                                     <  2:256330/150‑1 (MQ=32)
                          gctgaaCCAGGTCGTTCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGc                                                                                                                    <  2:768494/148‑1 (MQ=255)
                          gatgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCCAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTg                                                                                                                       >  2:408777/1‑147 (MQ=17)
                          gatgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTg                                                                                                                       <  1:408777/147‑1 (MQ=32)
                          gatgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGc                                                                                                                    <  2:757891/150‑1 (MQ=32)
                            tgatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGACGTGGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGccc                                                                                                                  >  1:803797/1‑150 (MQ=255)
                            taatCCAGGGCGCGCATTCCGTCTTGAGCAAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGccc                                                                                                                  <  2:172026/148‑1 (MQ=17)
                             gatCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCAAGATGATCACCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTTGCTAATCGAAATCTGCGGATTATCTGGGCCCt                                                                                                                 >  2:379786/1‑150 (MQ=12)
                               tCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCATGt                                                                                                               <  2:592199/150‑1 (MQ=17)
                                ccAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGtt                                                                                                              >  1:704840/1‑150 (MQ=32)
                                   gggCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTAGGCCCTGTTACa                                                                                                           >  2:703038/1‑150 (MQ=17)
                                       gcgcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGc                                                                                                       >  2:420337/1‑150 (MQ=32)
                                         gcATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGa                                                                                                     >  2:249448/1‑150 (MQ=32)
                                                   ttGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTAc                                                                                           <  1:366405/150‑1 (MQ=32)
                                                      aGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCaa                                                                                        <  1:96753/150‑1 (MQ=32)
                                                      aGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCaa                                                                                        <  1:249448/150‑1 (MQ=32)
                                                               aGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGAACAGGCTGGCTAATCCAAATCTGCGGATTATCTGGGCACTGATACAGAGCAATCAGGATCACCAACGCACACcg                                                                               >  1:69011/1‑150 (MQ=11)
                                                                 gCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGTCTATCCCGCTTTGGGCGCAAGGAGACTTCTATCAGGCTGGCGAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACAAACGCAAACcgaa                                                                             >  1:534655/1‑150 (MQ=11)
                                                                 gCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAACGAGGCGCAGCGTAGGCTGGCTAATCGCAAGCTGCGGCTTATCTGGGCCATGTTCCAGACCGTTCAGGTTTACCAACGCAAACcgaa                                                                             >  2:647306/1‑150 (MQ=11)
                                                                   cTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaacg                                                                           >  2:331589/1‑150 (MQ=32)
                                                                              agccagcctgatcgccgcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcaTCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAgg                                                               >  2:149909‑M2/65‑150 (MQ=255)
                                                                                    gatgatCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCt                                                          >  1:499814/1‑150 (MQ=32)
                                                                                       GATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGc                                                                                                       <  1:897288‑M1/102‑1 (MQ=255)
                                                                                       GATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGc                                                                                                       >  2:897288‑M1/1‑102 (MQ=255)
                                                                                        gTCGCCGCCTCTTGGGGGGGTTATCCCGTTTTGGGCGCAAGGAGGCGGCGATCAGGCTGGTTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGa                                                      >  1:319865‑M1/2‑150 (MQ=255)
                                                                                           gccgcctccttgcgcccaaggcgggatagctagcgcaagaggcggcgatcaTCTGGCTGATCGGAATCTGCGGATTTTCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCct                                                  >  2:179371‑M2/52‑150 (MQ=255)
                                                                                            ccgcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcaGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCct                                                  >  2:815440‑M2/51‑150 (MQ=255)
                                                                                              tccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcatctGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCctct                                                >  1:270923‑M2/49‑150 (MQ=255)
                                                                                              gcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcaGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaac                                                                            <  1:471517‑M2/74‑1 (MQ=255)
                                                                                              gcctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcaGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACcgaac                                                                            >  2:471517‑M2/49‑122 (MQ=255)
                                                                                               cctccttgcgcccaaggcgggatagccagcgcaagaggcggagatcaGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTg                                               >  2:244720‑M2/48‑150 (MQ=255)
                                                                                                ctccttgcgcccaaggcgggatagccagcgcaagaggcggcgatcaTCTGGCTGATCGGAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGAc                                             >  1:152334‑M2/47‑150 (MQ=255)
                                                                                                ctccttgcgcccaaggcgggatagccagcgcaagaggcggagatcaGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGa                                              <  1:244720‑M2/104‑1 (MQ=255)
                                                                                                CTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCTGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATTTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGAAAACCAAACGAAAAACCGGAGGCGGCTATGAGCCTCTGa                                              >  2:385875‑M1/1‑150 (MQ=255)
                                                                                                CTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGa                                              >  1:625809‑M1/1‑150 (MQ=255)
                                                                                                CTCGTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACAAAAAGAAAAACCGGAGGCGGCTATGAGCCTCTGa                                              >  2:110567‑M1/1‑150 (MQ=255)
                                                                                                   ttGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCa                                           >  1:303818/1‑150 (MQ=32)
                                                                                                       cgcccaaggcgggatagccagcgcaagaggcggcgatcaGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCg                                       <  1:815440‑M2/111‑1 (MQ=255)
                                                                                                             tATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGc                                                    >  1:276046/1‑131 (MQ=33)
                                                                                                             tATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGc                                                    <  2:276046/131‑1 (MQ=33)
                                                                                                             tATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAAt                                 <  2:534655/150‑1 (MQ=32)
                                                                                                               tCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGc                               <  1:331589/150‑1 (MQ=32)
                                                                                                                  cGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGa                                              >  2:119361/1‑132 (MQ=32)
                                                                                                                  cGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGGTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGa                                              <  1:119361/132‑1 (MQ=17)
                                                                                                                  cGCCTTGGGCCCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCAc                            >  2:233108/1‑150 (MQ=17)
                                                                                                                     cTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCgg                         >  1:82544/1‑150 (MQ=32)
                                                                                                                             cAAGGCGGCGGCGATAAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGCGTCGCTGACCAACCGGGTAATGCCACCGGGGCGCTAg                 <  1:647306/150‑1 (MQ=11)
                                                                                                                             cAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCAGATTATCCGGGCCATGTTCAAGAGAAATAAGGTCTACTTATGCAATCTGAACGAAAAACCGGAGGCGGCTATGATCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAg                 <  2:807732/150‑1 (MQ=11)
                                                                                                                                ggaggCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGgcg              <  1:233108/150‑1 (MQ=32)
                                                                                                                                ggaggCGGCGATCAGGCTGGCTAATCGAAATCCGCGGATTATCTGGGCGCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGacg              >  1:18118/1‑150 (MQ=12)
                                                                                                                                   ggcggcgatcaGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTc           <  1:616120‑M2/139‑1 (MQ=255)
                                                                                                                                    gcggcgatcaGGTTGGCTAATAGAAATCTGGGGTTTATCTGGGCCCTGTTACAGAGCGATCAGGTCTACCAACCCAAACCGAACAAAAAACCGGAGGCGGCTATGAGCCTTTAACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTcc          <  2:704840‑M2/140‑1 (MQ=255)
                                                                                                                                         gatcaGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAAccc     >  2:709761‑M2/6‑150 (MQ=255)
                                                                                                                                         gatcaGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAAccc     >  2:805260‑M2/6‑150 (MQ=255)
                                                                                                                                         gatcaGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGATATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAAccc     >  2:681637‑M2/6‑150 (MQ=255)
                                                                                                                                           tcaGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCt   <  2:499814‑M2/147‑1 (MQ=255)
                                                                                                                                            caGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTg  <  1:616641‑M2/148‑1 (MQ=255)
                                                                                                                                             aGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTa                                                                                            <  2:440131‑M2/58‑1 (MQ=255)
                                                                                                                                             aGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTa                                                                                            >  1:440131‑M2/2‑59 (MQ=255)
                                                                                                                                             aGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAAt                                 >  1:910469‑M2/2‑118 (MQ=255)
                                                                                                                                             aGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAAt                                 <  2:910469‑M2/117‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                                   
CGCGGTGACGGCTACATACGCAGCCTGATGATCCAGGGCGCGCATTCCGTCTTGAGCCAGCTAAGGCCTGATTCCGATCAGCCAGATGATCGCCGCCTCTTGCGCTGGCTATCCCGCCTTGGGCGCAAGGAGGCGGCGATCAGGCTGGCTAATCGAAATCTGCGGATTATCTGGGCCCTGTTACAGAGCGATCAGGTTTACCAACGCAAACCGAACGAAAAACCGGAGGCGGCTATGAGCCTCTGACCAACCGGGTAATGCCACCGGGGCGCTAGGCGCTCCAACCCCTG  >  NC_002947/401231‑401520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.