| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4647603 = | 23 (0.610) | 8 (0.300) | 7/192 | 2.5 | 41.8% | intergenic (+10/+121) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
| ? | NC_002947 | 4647711 = | 6 (0.220) | intergenic (+118/+13) | fusB/PP_4112 | elongation factor G 2/sulfate transporter | |||||
CCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAT‑GCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATC > NC_002947/4647608‑4647852 | CCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGcttc > 2:510673‑M1/1‑150 (MQ=255) ACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAAtg > 1:449723‑M1/1‑103 (MQ=255) ACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAAtg < 2:449723‑M1/103‑1 (MQ=255) CCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAT‑Gc < 2:766777‑M1/150‑1 (MQ=255) ctacaggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCaa < 1:332441‑M2/17‑1 (MQ=255) ctacaggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCaa > 2:332441‑M2/77‑93 (MQ=255) ctacaggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTcgccc < 1:10757‑M2/29‑1 (MQ=255) ctacaggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTcgccc > 2:10757‑M2/77‑105 (MQ=255) CTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGGGGGTTTACCCGCGAAGAGGCCGGCACAGACAGCAACTGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAT‑GCACCAcg < 1:760268‑M1/150‑1 (MQ=255) TACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGc < 2:887790‑M1/119‑1 (MQ=255) TACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGc > 1:887790‑M1/1‑119 (MQ=255) caggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAT‑GCACCACgcgc > 2:837928‑M2/74‑150 (MQ=255) CAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTcgcccgcc < 2:711421‑M1/105‑1 (MQ=255) CAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTcgcccgcc > 1:711421‑M1/1‑105 (MQ=255) aggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAT‑GCACCACGCGCa > 2:5477‑M2/73‑150 (MQ=255) GATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTCCTTGCACCGCTCCTACAAAT‑GCACCACGCGCaaa < 2:904072‑M1/150‑1 (MQ=255) GATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACACCTTCGCGCACCGCTCCGACAAAT‑GCACCACGCGCaaa < 2:310866‑M1/150‑1 (MQ=255) ggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCCTGCACCGCTCCGACCAAT‑GCACCACGCGCAAATGc > 2:74474‑M2/68‑150 (MQ=255) aGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGTAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGGTCCGACAAAT‑GCACCACGCGCAAATGCTTGccc < 1:310866/150‑1 (MQ=255) ccAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAAc > 1:862150/1‑98 (MQ=255) ccAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAAc < 2:862150/98‑1 (MQ=255) cAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAT‑GCACCACGCGCAAATGCTTGCCCGCCtt < 1:766777/150‑1 (MQ=255) ttgggcctgcggccatcctgtaggagcgggtttacgcgcgaataggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTGCTTGCACCGCACCGACAAAT‑GCACCACGCGCAAATGCTTGCCCGCCTTg < 1:74474‑M2/95‑1 (MQ=255) aaaCATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACaaa < 1:575310/120‑1 (MQ=255) aaaCATTGTGCGCCCCCCTGTAGGAGCGGGTCTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACaaa > 2:575310/1‑120 (MQ=255) gtaggagcgggtttacccgcgaagaggccggaaacgACCGCAACAGTTTTCAAGTCTGCTCGCCCGCCCGCTGCAACAGCTTCTTGCACCGCTCCGACAAAT‑GCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAggg > 1:534629‑M2/37‑150 (MQ=255) gcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAT‑GCACCACGCGCAAATGCTTGc < 2:881492‑M2/87‑1 (MQ=255) gcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAT‑GCACCACGCGCAAATGCTTGc > 1:881492‑M2/31‑117 (MQ=255) ccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCAc > 2:580823‑M2/21‑73 (MQ=255) ccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCAc < 1:580823‑M2/53‑1 (MQ=255) gaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAt > 1:34798‑M2/17‑82 (MQ=255) gaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAt < 2:34798‑M2/66‑1 (MQ=255) ccGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGGCAAGCCTC‑CGACTGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTTAGGGAAGCAACTGCCGaataac > 1:294512/1‑149 (MQ=255) cggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAT‑GCACCACGCCCAAATGCTTGCCCCCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCACCGGCCGAatcatc > 1:32254‑M2/9‑150 (MQ=255) | CCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAAT‑GCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATC > NC_002947/4647608‑4647852 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |