New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 358055 =43 (0.650)19 (0.380) 16/200 2.9 46.2% intergenic (+20/‑110) tdcG‑I/PP_5441 L‑serine dehydratase/hypothetical protein
?NC_002947 358133 = 12 (0.240)intergenic (+98/‑32) tdcG‑I/PP_5441 L‑serine dehydratase/hypothetical protein

CCACACTGATCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/358230‑358055
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggcttgcccgcgaagaggcccTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGGCGC  >  NC_002947/358133‑358281
                                                                                                                                                                                                                                                                                                                                     
CCACACTGATCGCGACATCCGACGATCGGTAGGCGGTGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAG                                                                                                                                                                                 <  2:343423/150‑1
  ACACTGATCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGA                                                                                                                                                                               <  2:731010/150‑1
   CACTGATCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCCCCGAACCATAAAGTGGCATAGGCTGTTGTGTTGAACCTGCATCAGCCTCAAGGGCCTCTTCGCTGGCAAGCCCGCTCCTACAGGAACTGTGCAATCCCTGTAGGAG                                                                                                                                                                              <  2:768422/150‑1
    ACTGATCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCCCCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGC                                                                                                                                                                             <  2:1641799/150‑1
          CGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTT                                                                                                                                                                       <  1:928505/150‑1
            CGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCACCAGCCTCAATGGCCTCTTCGCGGGCAAGCCCGCTCCTACAAAGACTTCGCAGTTCCTGTAGGAGCGGGCTTGC                                                                                                                                                                     <  1:874264/150‑1
              ACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCC                                                                                                                                                                   <  1:1023053/150‑1
                    GACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAG                                                                                                                                                             >  1:320826/1‑150
                          CGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAG                                                                                                                                                                                 >  2:9898/1‑124
                          CGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAG                                                                                                                                                                                 <  1:9898/124‑1
                                  GGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGG                                                                                                                                                                          >  2:673162/1‑123
                                  GGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGG                                                                                                                                                                          <  1:673162/123‑1
                                                                ATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGAACTGTGCAATCCCTGTAGGAGCG                                                                                                                                                                            <  2:1320255/91‑1
                                                                ATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGAACTGTGCAATCCCTGTAGGAGCG                                                                                                                                                                            >  1:1320255/1‑91
                                                                                 ACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAG                                                                                                                                                                                 <  1:292843/69‑1
                                                                                 ACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAG                                                                                                                                                                                 >  2:292843/1‑69
                                                                                  ggTGCAACAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGG                                                                                                                                                                                <  1:398445/67‑1
                                                                                  ggTGCAACAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGG                                                                                                                                                                                >  2:398445/3‑69
                                                                                                    GCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCG                                                                                                                                                                            >  2:1476600/1‑55
                                                                                                    GCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCG                                                                                                                                                                            >  2:1476475/1‑55
                                                                                                    GCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCG                                                                                                                                                                            <  1:1476475/55‑1
                                                                                                    GCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCG                                                                                                                                                                            <  1:1476600/55‑1
                                                                                                         TTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTG                                                                                                                                                                                    >  2:565051/1‑42
                                                                                                         TTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTG                                                                                                                                                                                    <  1:565051/42‑1
                                                                                                                          TCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTAT                                                                                                                     >  1:1568406/1‑88
                                                                                                                          TCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTAT                                                                                                                     <  2:1568406/88‑1
                                                                                                                            CTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGAT                                                                                                >  2:510541/1‑107
                                                                                                                            CTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGAT                                                                                                <  1:510541/107‑1
                                                                                                                             TACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGG                                                    >  1:845278/1‑150
                                                                                                                             TACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGG                                                    >  2:986569/1‑150
                                                                                                                             TACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCG                                                                        >  1:1330056/1‑130
                                                                                                                             TACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCG                                                                        <  2:1330056/130‑1
                                                                                                                             TACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGAT                                                                                                >  1:204166/1‑106
                                                                                                                             TACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGAT                                                                                                <  2:204166/106‑1
                                                                                                                             TACAGGGATTGCACACTTCCTCGATGAGCGGGCTTGGCCTCGTTGAGGCTCTTGAGGCCGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGG                                                    >  1:868574/1‑150
                                                                                                                              ACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGC                                                   >  2:1087772/1‑150
                                                                                                                                AGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGA                                                                      >  2:276139/1‑129
                                                                                                                                AGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGA                                                                      <  1:276139/129‑1
                                                                                                                                 GGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGC                                                                                                      <  1:182914/96‑1
                                                                                                                                 GGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGC                                                                                                      >  2:182914/1‑96
                                                                                                                                  GGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGAT                                                                     >  1:904758/1‑128
                                                                                                                                  GGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGAT                                                                     <  2:904758/128‑1
                                                                                                                                      TGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGG                                           <  1:1087772/150‑1
                                                                                                                                               CCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTA                                  >  2:1172611/1‑150
                                                                                                                                                CTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAA                                 >  2:615262/1‑150
                                                                                                                                                 TGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAA                                >  2:1178937/1‑150
                                                                                                                                                 TGTAGGAGCGGGCTTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAA                                <  2:868574/150‑1
                                                                                                                                                              TTGCCCGCGAAGTGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGT                                          <  1:591126/127‑1
                                                                                                                                                              TTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACCCACCTGACCACGTTTTGTGATTGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTG                   <  2:874264/150‑1
                                                                                                                                                              TTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTG                   <  1:1172611/150‑1
                                                                                                                                                              TTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGT                                          >  2:591126/1‑127
                                                                                                                                                              TTGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATAAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTG                   >  2:806557/1‑150
                                                                                                                                                               TGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGCTCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGG                  <  1:768422/150‑1
                                                                                                                                                               TGCCCGCGAAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGG                  <  2:1023053/150‑1
                                                                                                                                                                       AAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGG                  <  2:177539/142‑1
                                                                                                                                                                       AAGAGGCCCTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGG                  >  1:177539/1‑142
                                                                                                                                                                           GGCCCTTGAGGCTGATGCAGGTGCAACACAACCTCCTATGCGTCTTTATGGTGCGGTGATGGGCGCCACGCCTACCGATAGTCGGATGTCGCGATGAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTTGGAGACCCATGag      >  1:810440/1‑148
                                                                                                                                                                               CTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGCCCCTTAAAGGTGTCGCTTCTGGGAAACCCATGCGGCGC  <  1:806557/150‑1
                                                                                                                                                                               CTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGGCGC  >  2:1001482/1‑150
                                                                                                                                                                                                                                                                                                                                     
CCACACTGATCGCGACATCCGACGATCGGTAGGCGGGGCGCCCATCACCGCACCATAAAGAGGCATAGGCGGTTGTGTTGCACCTGCATCAGCCTCAAGGGCCTCTTCGCGGGCAAGCCCGCTCCTACAGGGATTGCACAGTTCCTGTAGGAGCGGGCTTGCCCGCGAAGAGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/358230‑358055
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtaggagcgggcttgcccgcgaagaggcccTTGAGGCTGATGCAGGTGCAACACAACCGCCTATGCCTCTTTATGGTGCGGTGATGGGCGCCCCGCCTACCGATCGTCGGATGTCGCGATCAGTGTGGGCGTTGTCGGTGACACTTAAAGGTGTCGCTTCTGGGAAACCCATGCGGCGC  >  NC_002947/358133‑358281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.