New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 851021 = | 21 (1.120) | 3 (0.160) | 3/242 | NT | 12.9% | intergenic (‑601/‑204) | pcs/hemA | phosphatidylcholine synthase/glutamyl‑tRNA reductase |
? | NC_002947 | = 2085560 | 20 (1.080) | intergenic (+226/‑369) | PP_1864/PP_1865 | hypothetical protein/transposase |
AGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/851093‑851021 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCATCGCCTGAACTACCGCGCGCTTAGAAG < NC_002947/2085560‑2085413 AGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTC < 2:339738/150‑1 CTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAG > 1:507157/1‑127 CTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTCGGGCACAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTGCGCAAG < 2:507157/127‑1 GGGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCATCGCCTGAACTACCGCGCGCTTAGAAG < 2:57388/150‑1 AGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGATCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/851093‑851021 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggGCTTGCTCCCGGGAGGACCGCGCTGCAGGCCCCATCCTGGGGCCCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTCCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCATCGCCTGAACTACCGCGCGCTTAGAAG < NC_002947/2085560‑2085413 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |