New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2622525	6 (0.320)	3 (0.170)	3/234	NT	27.6%	intergenic (+273/‑75)	PP_5515/PP_5516	hypothetical protein/hypothetical protein
	?	NC_002947	= 2622573	10 (0.560)					intergenic (+321/‑27)	PP_5515/PP_5516	hypothetical protein/hypothetical protein

GGAAACCCCAGTAAACACGGGACCTGTCACCAGATTAAGAATCCCGCGCTCCACCTTTCCAGCCTCACAGGCGGCCATCTTCGGCCCTTTGTGGGGCTTTTTTGGGCCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2622415‑2622525 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctcTGCGCAAAAACAGATAGCCGAACGTCCACACGCTTAGGATTTGCCGCTGAGGGCCC  <  NC_002947/2622573‑2622518                                                                                                                                                                         GGAAAACCCAGTAAACACGGGACCTGTCACCAGATTAAGAATCCCGCGCTCCACCTTTCCAGCCTCACAGGCGGCCATCTTCGGCCCTTTGTGGGGCTTTTTTGGGCCCTCTGCGCAAAAACAGATAGCCGAACGTCCACACGCTTAGGA                   >  2:274298/1‑150                CACGGGACCTGTCACCAGATTAAGAATCCCGCGCTCCACCTTTCCAGCCTCACAGGCGGCCATCTTCGGCCCTTTGTGGGGCTTTTTTGGGCCCTCTGCGCAAAAACAGATAGCCGAACGTCCACACGCTTAGGATTTGCCGCTGAGGGC    <  2:210585/150‑1                  CGGGACCTGTCACCAGATTAAGAATCCCGCGCTCCACCTTTCCAGCCTCACAGGCGGCCATCTTCGGCCCTTTGTGGGGCTTTTTTGGGCCCTCTGCGCAAAAACAGATAGCCGAACGTCCACACGCTTAGGATTTGCCGCTGAGGGCCC  <  1:274298/150‑1                                                                                                                                                                         GGAAACCCCAGTAAACACGGGACCTGTCACCAGATTAAGAATCCCGCGCTCCACCTTTCCAGCCTCACAGGCGGCCATCTTCGGCCCTTTGTGGGGCTTTTTTGGGCCCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2622415‑2622525 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccctcTGCGCAAAAACAGATAGCCGAACGTCCACACGCTTAGGATTTGCCGCTGAGGGCCC  <  NC_002947/2622573‑2622518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.