New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4014845 =	19 (1.010)	4 (0.230)	4/226	NT	19.8%	coding (157/1404 nt)	PP_3543	iron‑sulfur cluster‑binding protein
	?	NC_002947	4014880 =	15 (0.870)					coding (192/1404 nt)	PP_3543	iron‑sulfur cluster‑binding protein

TTTCCCAGGTCCCACAGTACGGCCTGGCGGCCGTTCCAGTTCAGCCAGGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4014897‑4014845 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggccgtACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGCCTTTGGCCTGTTCGCCATCACCGTCTACGCCGGTCGCGTCTGGTGCGGT  >  NC_002947/4014880‑4015024                                                                                                                                                                                                        TTTCCCAGGTCCCACAGTACGGCCTGGCGGCCGTTCCAGTTCAGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGCC                                                  >  1:435395/1‑150                  TACGGCCTGGCGGCCGTTCCAGTTCAGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGA                                                                                       >  1:254918/1‑96                  TACGGCCTGGCGGCCGTTCCAGTTCAGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGA                                                                                       <  2:254918/96‑1                             GGCCGTTCCAGTTCAGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGCCTTTGGCCTGTTCGCCATCACCGTCTACG                      <  2:435395/150‑1                                                 GCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCTTCTGTGCCTTTGGCCTGTTCGCCATCACCGTCTACGCCGGTCGCGTCTGGTGCGGT  >  2:291545/1‑150                                                                                                                                                                                                        TTTCCCAGGTCCCACAGTACGGCCTGGCGGCCGTTCCAGTTCAGCCAGGCCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4014897‑4014845 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggccgtACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGCCTTTGGCCTGTTCGCCATCACCGTCTACGCCGGTCGCGTCTGGTGCGGT  >  NC_002947/4014880‑4015024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.