New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4014845 =	19 (1.010)	4 (0.230)	4/226	NT	19.8%	coding (157/1404 nt)	PP_3543	iron‑sulfur cluster‑binding protein
	?	NC_002947	4014880 =	15 (0.870)					coding (192/1404 nt)	PP_3543	iron‑sulfur cluster‑binding protein

CAGCATCCAAGCACGACGCACCGACAGCGGCATCCATACCCGCAGCTTTACCGGGCTTTACCGTAACCTGCGCATCGGCTTTGCCGGCGCCCTGTTCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGCCTTTGGCCTGTTCGCCATCACCGTCTACGCCGGTCGCGTCTGGTGCGGT  >  NC_002947/4014733‑4015024                                                                                                                                                    |                                                                                                                                                 cagcATCCAAGCACGACGCACCGACAGCGGCATCCATACCCGCAGCTTTACCGGGCTTTACCGTAACCTGCGCATCGGCTTTGCCGGCGCCCTGTTCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACt                                                                                                                                                >  2:456750/1‑150 (MQ=255)            cACGACGCACCGACAGCGGCATCCATACCCGCAGCTTTACCGGGCTTTACCGTAACCTGCGCATCGGCTTTGCCGGCGCCCTGTTCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTgg                                                                                                                                     <  1:296570/150‑1 (MQ=255)                ggcacagatgatcagcagcgccgacagcaggatgaagtcctggggccagaaggtggcgccgaagatgtggaacttgctgtttcccaggtcccacagtACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGaaa                                                                                                                                 >  1:435395‑M1/98‑150 (MQ=255)                    aCCGACAGCGGCATCCATACCCGCAGCTTTACCGGGCTTTACCGTAACCTGCGCATCGGCTTTGCCGGCGCCCTGTTCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGc                                                                                                                             >  1:392319/1‑150 (MQ=255)                               cATCCATACCCGCAGCTTTACCGGGCTTTACCGTAACCTGCGCATCGGCTTTGCCGGCGCCCTGTTCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACAt                                                                                                                  <  1:456750/150‑1 (MQ=255)                                          gCAGCTTTACCGGGCTTTACCGTAACCTGCGCATCGGCTTTGCCGGCGCCCTGTTCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCa                                                                                                       >  1:383232/1‑150 (MQ=255)                                               tttACCGGGCTTTACCGTAACCTGCGCATCGGCTTTGCCGGCACCCTGTTCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCCCCTTc                                                                                                  >  1:39957/1‑150 (MQ=255)                                                     tcctggggccagaaggtggcgccgaagatgtggaacttgctgtttcccaggtcccacagtACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTa                                                                                                                                                  >  1:254918‑M1/61‑96 (MQ=255)                                                     tcctggggccagaaggtggcgccgaagatgtggaacttgctgtttcccaggtcccacagtACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTa                                                                                                                                                  <  2:254918‑M1/36‑1 (MQ=255)                                                        cTTTACCGTAACCTGCGCATCGGCTTTGCCGGCGCCCTGTTCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAg                                                                                         <  1:346028/150‑1 (MQ=255)                                                         tttACCGTAACCTGCGCATCGGCTTTGCCGGCGCCCTGTTCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGGAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAgg                                                                                        >  1:262238/1‑150 (MQ=255)                                                          ttACCGTAACCTGGGCATCGGCTTTGCCGGCACCCTTTGCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCGGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGa                                                                                       <  2:39957/150‑1 (MQ=255)                                                              cGTAACCTGCGCATCGGCTTTGCCGGCGCCCTGTTCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTc                                                                                   <  2:392319/150‑1 (MQ=255)                                                                                            cTGTTCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCtgt                                                     >  1:320634/1‑150 (MQ=255)                                                                                               tttcccaggtcccacagtacggcctggcggccgttccagttcagccaggccgtACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGcc                                                  >  1:435395‑M2/54‑150 (MQ=255)                                                                                                      tGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGCCTTTgg                                             <  2:494185/148‑1 (MQ=255)                                                                                                      tGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGCCTTTgg                                             >  1:494185/1‑148 (MQ=255)                                                                                                          cttcGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGCCTTTGGCCTGtt                                       >  1:343874/1‑150 (MQ=255)                                                                                                                tacggcctggcggccgttccagttcagccaggccgtACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGa                                                                                       <  2:254918‑M2/60‑1 (MQ=255)                                                                                                                tacggcctggcggccgttccagttcagccaggccgtACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGa                                                                                       >  1:254918‑M2/37‑96 (MQ=255)                                                                                                                          ttGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGCCTTTGGCCTGTTCGCCATCACCGTCTAc                       <  2:383232/149‑1 (MQ=255)                                                                                                                           ggccgttccagttcagccaggccgtACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGCCTTTGGCCTGTTCGCCATCACCGTCTACg                      <  2:435395‑M2/125‑1 (MQ=255)                                                                                                                                tGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGCCTTTGGCCTGTTCGCCATCACCGTCTACGCCGGt                 >  2:192565/1‑150 (MQ=255)                                                                                                                                               gccgtACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCTTCTGTGCCTTTGGCCTGTTCGCCATCACCGTCTACGCCGGTCGCGTCTGGTGCGGt  >  2:291545‑M2/6‑150 (MQ=255)                                                                                                                                                    |                                                                                                                                                 CAGCATCCAAGCACGACGCACCGACAGCGGCATCCATACCCGCAGCTTTACCGGGCTTTACCGTAACCTGCGCATCGGCTTTGCCGGCGCCCTGTTCGTGCTGTTCTTCGGCACGGCCTGGCTGAACTGGAACGGCCGCCAGGCCGTACTGTGGGACCTGGGAAACAGCAAGTTCCACATCTTCGGCGCCACCTTCTGGCCCCAGGACTTCATCCTGCTGTCGGCGCTGCTGATCATCTGTGCCTTTGGCCTGTTCGCCATCACCGTCTACGCCGGTCGCGTCTGGTGCGGT  >  NC_002947/4014733‑4015024

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.