New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4647641	5 (0.270)	4 (0.310)	3/168	NT	46.0%	intergenic (+48/+83)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	= 4647671	6 (0.470)					intergenic (+78/+53)	fusB/PP_4112	elongation factor G 2/sulfate transporter

GGGTGAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4647455‑4647641 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgccggcctcttcgcgggtaaacccgctcctacaggGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGGGTGAAC  <  NC_002947/4647671‑4647524                                                                                                                                                                                                                                                                                                                                                 GGGTGAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTCCTCCATGGCGCCCACCCGTTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCT                                                                                                                                                                                           <  1:189668/150‑1         TGTTCGGCTACGCCACCTCGATGCGCTCGATGCCCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGC                                                                                                                                                                                   <  1:126930/150‑1               GCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGACCCGCGGGGAGTAAGCGGTTCTTCTGTGCCGGCCTCTTC                                                                                                                                                                             >  1:155620/1‑150                   CGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGG                                                                                                                                                                         <  2:240370/150‑1                          TCGATCCACTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACC                                                                                                                                                                  <  1:152458/150‑1                                 GCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCT                                                                                                                                                           >  1:141353/1‑150                                                                               CTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTTCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGC                                                                                                             <  2:155620/150‑1                                                                               CTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCGGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGC                                                                                                             <  2:166497/150‑1                                                                                         GCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGTGCGGGTTTACCC                                                                                                   >  1:231961/1‑150                                                                                                gGAGTATTGCCGATGGCATCGTGAAGAGGAGCCGCGGGGAGTAAGCGGTTCTACTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACGATGTTTGGGCCTGCGGCCATGCTGTAGGAGCGGGTTTACCCGCGAAGA                                                                                            <  2:231961/149‑1                                                                                                                                                                  TTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATGCTGTAG                                                                                                                 >  2:329168/1‑63                                                                                                                                                                  TTCGCGGGTAAACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAG                                                                                                                 <  1:329168/63‑1                                                                                                                                                                             ACCCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGC               >  1:398122/1‑150                                                                                                                                                                               CCGCTCCTACAGGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCAT             >  2:209522/1‑150                                                                                                                                                                                         AGGGGGGCGCACAATATTTGAGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGGGTGAA   >  2:45774/1‑150                                                                                                                                                                                          GGGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGGGTGAAC  <  2:398122/150‑1                                                                                                                                                                                           GGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCT                                                    <  1:464986/99‑1                                                                                                                                                                                           GGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCT                                                    >  2:210779/1‑99                                                                                                                                                                                           GGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCT                                                    <  1:210779/99‑1                                                                                                                                                                                           GGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCT                                                    >  2:464986/1‑99                                                                                                                                                                                                                                                                                                                                                 GGGTGAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4647455‑4647641 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgtgccggcctcttcgcgggtaaacccgctcctacaggGGGGCGCACAATGTTTGGGCCTGCGGCCATCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGAGAACCGCTTACTCCCCGCGGCTCTTCTTGACGATGCCATCGGCAATGCTCGCCGGGGCCTCGGCATAGCGGGTGAAC  <  NC_002947/4647671‑4647524

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.