New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4647641	5 (0.270)	4 (0.310)	3/168	NT	46.0%	intergenic (+48/+83)	fusB/PP_4112	elongation factor G 2/sulfate transporter
	?	NC_002947	= 4647671	6 (0.470)					intergenic (+78/+53)	fusB/PP_4112	elongation factor G 2/sulfate transporter

GTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATA  >  NC_002947/4647524‑4647810                                                                                                                                                    |                                                                                                                                            gTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcc                                                                                                                                           <  2:398122‑M2/150‑3 (MQ=255)  ttCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCTCAAATATTGTGCGCCCCcct                                                                                                                                          >  2:45774‑M2/1‑147 (MQ=255)            aTGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgg                                                                                                                                >  2:209522‑M2/1‑137 (MQ=255)              gCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggt                                                                                                                              >  1:398122‑M2/1‑135 (MQ=255)                                                   agaagaGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCc                                                                                                                                            >  2:464986‑M2/1‑98 (MQ=255)                                                   agaagaGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCc                                                                                                                                            <  1:210779‑M2/99‑2 (MQ=255)                                                   agaagaGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCc                                                                                                                                            <  1:464986‑M2/99‑2 (MQ=255)                                                   agaagaGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCc                                                                                                                                            >  2:210779‑M2/1‑98 (MQ=255)                                                                                           tctTCGCGGGTAAACCCGCTCCTACAGCATGGCCGCAGGCCCAAACATCGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacagtagaaccgcttactccccgcggctcctcttcacgatgccatcggcaatactcc                                                 <  2:231961‑M2/150‑93 (MQ=255)                                                                                                  gggTAAACCCGCACCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacaggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggc                                          >  1:231961‑M2/1‑51 (MQ=255)                                                                                                         cccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAAtg                                                                                   <  1:189677/102‑1 (MQ=255)                                                                                                         cccGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAAtg                                                                                   >  2:189677/1‑102 (MQ=255)                                                                                                            gCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcaccggagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatag                                <  2:166497‑M2/150‑110 (MQ=255)                                                                                                            gCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaagaggccggcacagaagaaccgcttactccccgcggctcttcttgacgatgccatcggcaatgctcgccggggcctcggcatag                                <  2:155620‑M2/150‑110 (MQ=255)                                                                                                              tCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGcacca                              >  2:65743/1‑150 (MQ=255)                                                                                                                cTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaa                                                                                                                   <  1:329168‑M2/63‑27 (MQ=255)                                                                                                                cTACAGGATCGACGCAGACAACAACATTGAGGGCCCCCCTGTAGGAGCTGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCAcg                            >  2:260902/1‑150 (MQ=38)                                                                                                                cTACAGCATGGCCGCAGGCCCAAACATTGTGCGCCCCcctgtaggagcgggtttacccgcgaa                                                                                                                   >  2:329168‑M2/1‑37 (MQ=255)                                                                                                                       aTGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGAcc                                                                                                   >  2:172541/1‑72 (MQ=255)                                                                                                                       aTGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGAcc                                                                                                   <  1:172541/72‑1 (MQ=255)                                                                                                                             gCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGc               >  1:85448/1‑150 (MQ=255)                                                                                                                                          ttGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATa  <  2:85448/150‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                            GTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATA  >  NC_002947/4647524‑4647810

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.