New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 485836 | 14 (0.750) | 5 (0.280) | 5/236 | NT | 27.5% | coding (102/867 nt) | apaH | bis(5'‑nucleosyl)‑tetraphosphatase |
? | NC_002947 | = 485846 | 13 (0.720) | coding (92/867 nt) | apaH | bis(5'‑nucleosyl)‑tetraphosphatase |
TTCTTGAGGCGCTCGACGTTGTGCCAGGCGGCCAGCAGGTGCAGGTCATGGTTGCCCAGCACGCAGACCAGTGAATGACGGATCGAGTACAGGAAGCGCAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCGGGGTTGAAACTGACGCGATCGAGCAGGCATTTGAGCGGCTGCAGGCAGCCCTGCAGGTCACCGACGGCGTAGGTGGCCATCAGTGCAGCGCTCCGGGCACTGCCAGCCGGAAGGGG > NC_002947/485693‑485973 | ttCTTGAGGCGCTCGACGTTGTGCCAGGCGGCCAGCAGGTGCAGGTCATGGTTGCCCAGCACGCAGACCAGTGAATGACGGATCGAGTACAGGAAGCGCAGGGTTTCCAGTGACTCTGGGCCGCGGTTGACCAGGTCGCCGACCAGCcac < 1:98379/150‑1 (MQ=255) gTTGTGCCAGGCGGCCAGCAGGTGCAGGTCATGGTTGCCCAGCACGCAGACCAGTGAATGACGGATCGAGTACAGGAAGCGCAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGCCGTCGACCgcctgtggctggtcggcgacctg < 2:212456‑M1/150‑24 (MQ=255) gTTGTGCCAGGCGGCCAGCAGATGCAGGTCATGGTTGCCCAGCACGCAGACCAGTGAATGACGGATCGAGTACAGGAAGCGCAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCggg < 1:297333/150‑1 (MQ=255) ccAGCACGCAGACCAGTGAATGACGGATCGAGTACAGGAAGCGCAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCGGGGTTGAAACTGACGCGATCGAGCAGGCATTTGAGCGGCt > 1:329440/1‑150 (MQ=255) cACGCAGACCAGTGAATGACGGATCGAGTACAGGAAGCGCAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCGGGGTTGAAACTGACGCGATCGAGCAGGCATTTGAGCGGCTtcag < 2:253160/150‑1 (MQ=255) aCGCAGACCAGTGAATGACGGATCGAGTACAGGAAGCGCAGGGTTTTCGGTGACTC‑GGGCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCGGGGTTGAAACTGACGCGATCGAGCAGGCATTTGAGCGGCTgcaggc > 2:71894/1‑150 (MQ=255) gTGAATGACGGATCGAGTACAGGAAGCGCAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCGGGGTTGAAACTGACGCGATCGAGCAGGCATTTGAGCGGCTGCAGGCAGCCCTGCa < 2:329440/150‑1 (MQ=255) tACAGGAAGCGCAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCGGGGTTGAAACTGACGCGATCGAGCAGGCATTTGAGCGGCTGCAGGCAGCCCTGc < 2:39711/132‑1 (MQ=255) tACAGGAAGCGCAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCGGGGTTGAAACTGACGCGATCGAGCAGGCATTTGAGCGGCTGCAGGCAGCCCTGc > 1:39711/1‑132 (MQ=255) gAAGCGCAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCgcctgtggctggtcggc < 1:145824‑M1/69‑18 (MQ=255) gAAGCGCAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCgcctgtggctggtcggc > 2:145824‑M1/1‑52 (MQ=255) gcAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGAcggcgg > 2:170599/1‑69 (MQ=255) gcAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGAcggcgg < 1:170599/69‑1 (MQ=255) aGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCgcctgtggctggtcggcgacctgg < 1:73712‑M1/69‑25 (MQ=255) aGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGGCGCCGACCgcctgtggctggtcggcgacctgg > 2:73712‑M1/1‑45 (MQ=255) gggCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCGGGGTTGAAACTGACGCGATCGAGCAGGCATTTGAGc < 2:153490/84‑1 (MQ=255) gggCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCGGGGTTGAAACTGACGCGATCGAGCAGGCATTTGAGc > 1:153490/1‑84 (MQ=255) ggCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCGGGGTTGAAACTGACGCGATCGAGCAGGCATTTGAGCGGCTGCAGGCAGCCCTGCAGGTCACCGACGGCGTAGGTGGCCATCAGTGCAGCGCTCCGGGCACTGc < 1:71894/150‑1 (MQ=255) aCCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCGGGGTTGAAACTGACGCGATCGAGCAGGCATTTGAGCGGCTGCAGGCAGCCCTGCAGGTCACCGACGGCGTAGGTGGCCATCAGTGCAGCGCTCCGGGCACTGCCAGCCGGAAgg > 1:174272/1‑150 (MQ=255) ccAGGTCGCCGACCAGCCACAGGCggtcggcgccctggtcaaccgcggccccgagtcactggaaaccct > 2:73712‑M2/1‑24 (MQ=255) ccAGGTCGCCGACCAGCCACAGGCggtcggcgacctggtcaaccgcggccccgagtcactggaaaccct < 1:73712‑M2/69‑46 (MQ=255) cAGGTCGCCGACCAGCCACAGGCggtcgacggcctggtcaaccgcggccccgagtcactggaaaccctgcgcttcctgtactcgatccgtcattcactggtctgcgtgctgggcaaccatgacctgcacctgctggccgcctggcacaac < 2:212456‑M2/150‑128 (MQ=255) gCCGACCAGCCACAGGCggtcggcgacctggtcaaccgcggccccgagtcactggaaaccctgcgcttc > 2:145824‑M2/1‑17 (MQ=255) gCCGACCAGCCACAGGCggtcggcgacctggtcaaccgcggccccgagtcactggaaaccctgcgcttc < 1:145824‑M2/69‑53 (MQ=255) | TTCTTGAGGCGCTCGACGTTGTGCCAGGCGGCCAGCAGGTGCAGGTCATGGTTGCCCAGCACGCAGACCAGTGAATGACGGATCGAGTACAGGAAGCGCAGGGTTTCCAGTGACTCGGGGCCGCGGTTGACCAGGTCGCCGACCAGCCACAGGCGGTCGACGGCGGGGTTGAAACTGACGCGATCGAGCAGGCATTTGAGCGGCTGCAGGCAGCCCTGCAGGTCACCGACGGCGTAGGTGGCCATCAGTGCAGCGCTCCGGGCACTGCCAGCCGGAAGGGG > NC_002947/485693‑485973 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |