New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 189576018 (0.960)4 (0.220) 4/234 NT 17.7% coding (952/1986 nt) PP_1700 acyltransferase
?NC_002947 = 1895766 20 (1.120)coding (958/1986 nt) PP_1700 acyltransferase

GGCAACTCGTGGTTCTGGTTTGTCGGCGCCATCTACCTCACGCAGATCCCGGCCTATGCCAAGGATTGGCTGCACGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGTTCGGCCTGCTGTGGTGGTGGCACTCCGGTGATGTACCGGCTGCAGCAGCGCCGCACGACTGGCTGGCACTGCT  >  NC_002947/1895622‑1895908
                                                                                                                                          |                                                                                                                                                    
ggCAACTCGTGGTTCTGGTTTGTCGGCGCCATCTACCTCACGCAGATCCCGGCCTATGCCAAGGATTGGCTGCACGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCCCGCTGTTGTgcgag                                                                                                                                           >  1:403292‑M2/1‑145 (MQ=255)
                ggTTTGTCGGCGCCATCTACCTCACGCAGATCCCGGCCTATGCCAAGGATTGGCTGCACGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTgcgagc                                                                                                                                          <  2:310042‑M2/135‑7 (MQ=255)
                ggTTTGTCGGCGCCATCTACCTCACGCAGATCCCGGCCTATGCCAAGGATTGGCTGCACGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTgcgagc                                                                                                                                          >  1:310042‑M2/1‑129 (MQ=255)
                      tCGGCGCCATCTACCTCACGCAGATCCCGGCCTATGCCAAGGATTGGCTGCACGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTg                                                                                                                      <  2:86178/149‑1 (MQ=255)
                      tCGGCGCCATCTACCTCACGCAGATCCCGGCCTATGCCAAGGATTGGCTGCACGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTg                                                                                                                      >  1:86178/1‑149 (MQ=255)
                                     tCACGCAGATCCCGGCCTATGCCAAGGATTGGCTGCACGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCGTCGCCTTATGCTAACAGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGc                                                                                                      >  2:140956/1‑150 (MQ=255)
                                                   gCCTATGCGAAGGGTTGGCGCCACGGGGAGGGCACGGTGGTGTCTCTGGTGCTGATCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGCTCGGCTCGTTc                                                                                        <  2:62508/150‑1 (MQ=255)
                                                    ccTATGCCAAGGATTGGCTGCACGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCg                                                                                       <  1:305800/150‑1 (MQ=255)
                                                               gATTGGCTGCACGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGt                                                                                                                       >  1:489082/1‑107 (MQ=255)
                                                               gATTGGCTGCACGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGt                                                                                                                       <  2:489082/107‑1 (MQ=255)
                                                                         aCGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCacaacagcgagcccagggcaatg                                                                                                                               <  1:77799‑M1/89‑24 (MQ=255)
                                                                         aCGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCacaacagcgagcccagggcaatg                                                                                                                               >  2:77799‑M1/1‑66 (MQ=255)
                                                                         aCGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGTTCGGCctgc                                                                  >  2:183007/1‑150 (MQ=255)
                                                                            gTGATGGCACGGTGGTGACCCTGGTGCTGACCCCGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGTTCGGCCTGCtgt                                                               >  2:61698/1‑150 (MQ=255)
                                                                              gATGGCACGCTCGTGACCCCGGTGCTGCGCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCTAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCGGTTCGGCTCGTTCGGCCTGCCCCTGTTCGGCCTGCTgtgg                                                             <  2:122112/150‑1 (MQ=255)
                                                                                                    tGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGTTCGGCCTGCTGTGGTGGTGGCACTCCGGTGATGTAc                                       >  2:423398/1‑150 (MQ=255)
                                                                                                          cccTGTTCTCGGTGGGCATTGCCCTGGGCTCGCacaacagcgagcccaggg                                                                                                                                    >  1:307844‑M1/1‑33 (MQ=255)
                                                                                                          cccTGTTCTCGGTGGGCATTGCCCTGGGCTCGCacaacagcgagcccaggg                                                                                                                                    <  2:307844‑M1/51‑19 (MQ=255)
                                                                                                           ccTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGTTCGGCCTGCTGTGGTGGTGGCACTCCGGTGTTGTACCGGCTgg                                >  2:369298/1‑149 (MQ=255)
                                                                                                                  tcGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGTTCGGCCTGCTGTGGTGGTGGCACTCCGGTGATGTACCGGCTGCAGCAgcg                         >  1:214599/1‑150 (MQ=255)
                                                                                                                     gTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGt                                                                           <  2:267817/97‑1 (MQ=255)
                                                                                                                     gTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGt                                                                           >  1:267817/1‑97 (MQ=255)
                                                                                                                          cATTGCCCTGGGCTCGCTGTTGTgcgagcccagggcaatgcccaccgagaacagggtcagcaccagggtcaccaccgtgccatcaccgt                                                                              <  1:77799‑M2/89‑67 (MQ=255)
                                                                                                                          cATTGCCCTGGGCTCGCTGTTGTgcgagcccagggcaatgcccaccgagaacagggtcagcaccagggtcaccaccgtgccatcaccgt                                                                              >  2:77799‑M2/1‑23 (MQ=255)
                                                                                                                               cccTGGGCTCGCTGTTGTgcgagcccagggcaatgcccaccgagaacaggg                                                                                                               >  1:307844‑M2/1‑18 (MQ=255)
                                                                                                                               cccTGGGCTCGCTGTTGTgcgagcccagggcaatgcccaccgagaacaggg                                                                                                               <  2:307844‑M2/51‑34 (MQ=255)
                                                                                                                                ccTGGGCTCGCTGTTGTGCGATCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGTTCGGCCTGCTGTGGTGGTGGCACTCCGGTGATGTACCGGCTGCAGCCGCGCCGCACGActggct           <  2:261152/150‑1 (MQ=255)
                                                                                                                                 cTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGTTCGGCCTGCTGTGGTGGTGGCACTCCGGTGATGTACCGGCTGCAGCAGCGCCGCACGActggctg          >  2:168697/1‑150 (MQ=255)
                                                                                                                                     gCTCGCacaacagcgagcccagggcaatgcccaccgagaacagggtcagcaccagggtcaccaccgtgccatcaccgtgcagccaatccttggcataggccgggatctgcgtgaggtagatggcgccgacaaacc                     <  2:310042‑M1/135‑130 (MQ=255)
                                                                                                                                     gCTCGCacaacagcgagcccagggcaatgcccaccgagaacagggtcagcaccagggtcaccaccgtgccatcaccgtgcagccaatccttggcataggccgggatctgcgtgaggtagatggcgccgacaaacc                     >  1:310042‑M1/1‑6 (MQ=255)
                                                                                                                                     gCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGTTCGGCCTGCTGTGGTGGTGGCACTCCGGTGATGTACCGGCTGCAGCAGCGCCGCACGACTGGCTGGCAc      <  1:183007/150‑1 (MQ=255)
                                                                                                                                      cTCGCacaacagcgggcccagggcaatgcccaccgagaacagggtcagcaccagggtcaccaccgtgccatcaccgtgcagccaatccttggcataggccgggatctgcgtgaggtagatggcgccgacaaaccagaaccacgagttgcc     >  1:403292‑M1/1‑5 (MQ=255)
                                                                                                                                         gCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGTTCGGCCTGCTGTGGTGGTGGCACTCCGGTGATGTACCGGCTGCAGCAGCGCCGCACGACTGGCTGGCActgct  >  1:78651/1‑150 (MQ=255)
                                                                                                                                          |                                                                                                                                                    
GGCAACTCGTGGTTCTGGTTTGTCGGCGCCATCTACCTCACGCAGATCCCGGCCTATGCCAAGGATTGGCTGCACGGTGATGGCACGGTGGTGACCCTGGTGCTGACCCTGTTCTCGGTGGGCATTGCCCTGGGCTCGCTGTTGTGCGAGCGGCTCAGTGGACGCAAGGTGGAAATCGGCCTGGTGCCGTTCGGCTCGTTCGGCCTGACCCTGTTCGGCCTGCTGTGGTGGTGGCACTCCGGTGATGTACCGGCTGCAGCAGCGCCGCACGACTGGCTGGCACTGCT  >  NC_002947/1895622‑1895908

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.