New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2303555 =	22 (1.170)	3 (0.170)	3/230	NT	12.6%	coding (1330/1632 nt)	PP_2027	hypothetical protein
	?	NC_002947	2303598 =	21 (1.200)					coding (1287/1632 nt)	PP_2027	hypothetical protein

ATCCGACAACGGCACGAAGCGCGCCGCCATCTCGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGG  >  NC_002947/2303409‑2303703                                                                                                                                                   |                                                                                                                                                     aTCCGACAACGGCACGAAGCGCGCCGCCATCTCGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGccc                                                                                                                                                   >  2:376812/1‑150 (MQ=255)    tgaacgtgctggacaacccggcactgagcgccgacaccccggtgggcgacaacagcagcgccagcaccctgctgtggccctggcagctgtccacactggtgtttgccctgaccaccgtgctgggctttgccctgtggtggcgcGCCCGtt                                                                                                                                                <  1:415146‑M1/7‑1 (MQ=255)        aaCGGCACGAAGCGCGCCGCCATCTCGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTgc                                                                                                                                            <  1:477652/150‑1 (MQ=255)                                tcGGCCAGGGTTTCCGGTTGCTGCCGGGCCGAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGGCTGGCATGCGGGCTTGAGGTCGTCCAGGAAGGTGGGTGGGCTTGGCACGTTCTGCGCCGTGAGCAGCACCGCTGGCcgc                                                                                                                    >  1:172251/1‑150 (MQ=255)                                tcGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGtt                                                                                                                                                >  2:61240/1‑122 (MQ=255)                                tcGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGtt                                                                                                                                                <  1:61240/122‑1 (MQ=255)                                        ccccggtgggcgacaacagcagcgccagcaccctgctgtggccctggcagctgtccacactggtgtttgccctgaccaccgtgctgggctttgccctgtggtggcgcGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGgc                                                                                                            >  2:217183‑M1/108‑150 (MQ=255)                                                     tgcCGGGCCCAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACgg                                                                                                              <  2:456169/135‑1 (MQ=255)                                                     tgcCGGGCCCAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACgg                                                                                                              >  1:456169/1‑135 (MQ=255)                                                       ccGGGCCCAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTc                                                                                                                                               <  2:58018/100‑1 (MQ=255)                                                       ccGGGCCCAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTc                                                                                                                                               >  1:58018/1‑100 (MQ=255)                                                            cccAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGccac                                                                                                     >  2:479911/1‑137 (MQ=255)                                                            cccAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGccac                                                                                                     <  1:479911/137‑1 (MQ=255)                                                            cccAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGc                                                                                        >  1:23826/1‑150 (MQ=255)                                                             ccAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGcc                                                                                       >  1:224519/1‑150 (MQ=255)                                                             ccAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGcc                                                                                       >  2:290841/1‑150 (MQ=255)                                                                       aGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACggtg                                                                             <  2:23826/150‑1 (MQ=255)                                                                             tGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAgg                                                                       <  1:44338/150‑1 (MQ=255)                                                                                              gTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGa                                                      >  1:56531/1‑150 (MQ=255)                                                                                                              cctgaccaccgtgctgggctttgccctgtggtggcgcGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACggg                                                                                                             >  1:37054‑M1/38‑79 (MQ=255)                                                                                                              cctgaccaccgtgctgggctttgccctgtggtggcgcGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACggg                                                                                                             <  2:37054‑M1/42‑1 (MQ=255)                                                                                                                           cgtcCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTgg                         <  2:224519/150‑1 (MQ=255)                                                                                                                            gtcCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGgc                        >  2:415146/1‑150 (MQ=255)                                                                                                                                 gCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCgctgc                   >  1:223331/1‑150 (MQ=255)                                                                                                                                 gCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCgctgc                   >  1:401081/1‑150 (MQ=255)                                                                                                                                          gTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCac                                                                                    <  2:132978/76‑2 (MQ=255)                                                                                                                                          gTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCac                                                                                    >  1:132978/1‑75 (MQ=255)                                                                                                                                              gCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCAc      >  1:302613/1‑150 (MQ=255)                                                                                                                                              gCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCAc      >  1:325739/1‑150 (MQ=255)                                                                                                                                                 tGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCgg   <  2:223331/150‑1 (MQ=255)                                                                                                                                                  ggCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCggg  <  2:46165/150‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                     ATCCGACAACGGCACGAAGCGCGCCGCCATCTCGGCCAGGGTTTCCGGTTGCTGCCGGGCCCAGGCATCCAGCGCCTGGCGCGTAGCCTGGGGGTCGTTGGCCTGGCATGCGCGCTTGAGGTCGTCCAGCAAGGTGCGTGGGCTTGGCCCGTTCTGCGCCGTGCGCAGCACCGCTGGCCGCGAACGGGCGCGCCACCACAGGGCAAAGCCCAGCACGGTGGTCAGGGCAAACACCAGTGTGGACAGCTGCCAGGGCCACAGCAGGGTGCTGGCGCTGCTGTTGTCGCCCACCGGG  >  NC_002947/2303409‑2303703

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.