| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3691685 = | 17 (0.900) | 3 (0.170) | 3/232 | NT | 14.3% | coding (177/600 nt) | PP_3257 | putative Methyltransferase |
| ? | NC_002947 | 3691733 = | 20 (1.130) | coding (129/600 nt) | PP_3257 | putative Methyltransferase | |||||
AGGTCAAAGCGGCCGCCGGGCCAGTCCCCCGGTAACCGGGCCCGTTCGACCGAGGCATTGTGCACGTGAGCCAGGCGTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGTAT > NC_002947/3691539‑3691829 | ctttgaatggagctgtcatgagcctcgatccacagtattttgccgagctatacgccaccaatgaagacccttgggcctttcgcacccgctggtacgagaggcgcaaacgcgagctggtgatggccagcctgccacgccagtgctatCAgc < 2:499738‑M1/4‑1 (MQ=255) tttgaatggagctgtcatgagcctcgatccacagtattttgccgagctatacgccaccaatgaagacccttgggcctttcgcacccgctggtacgagaggcgcaaacgcgagctggtgatggccagcctgccacgccagtgctatCAgcg < 2:203079‑M1/5‑1 (MQ=255) ggCCAGTCCCCCGGTAACCGGGCCCGTTCGACCGAGGCATTGTGCACGTGAGCCAGGCGTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAAAACCCCGCCAGCAGCGCGCTGAGCTCGCCAttt < 1:142511/150‑1 (MQ=255) tAACAGGGCCCGTTGGACCGAGGCATTGTGCACGTGAGCCAGGCGTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCtt < 2:9028/150‑2 (MQ=255) ccgagctatacgccaccaatgaagacccttgggcctttcgcacccgctggtacgagaggcgcaaacgcgagctggtgatggccagcctgccacgccagtgctatCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACgcgc > 2:52536‑M1/105‑150 (MQ=255) aTTGTGCACGTGAGCCAGGCGTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCg > 1:254369/1‑150 (MQ=255) ttGTGCACGTGAGCCAGGCGTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCCGCCACCCGCTCGGCCCGCAGTGCGCTCAGCTCGCCATTTGCGCAATCAGGCTCGAACACGCGCTGATAGCACTGGCGt < 1:317341/150‑1 (MQ=255) tgtgCACGTGAGCCAGGCGTTCACTGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTg < 1:445287/150‑1 (MQ=255) gTGAGCCAGGCGTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCt > 1:98686/1‑150 (MQ=255) gTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCa > 1:296608/1‑150 (MQ=255) cTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGt > 1:301301/1‑143 (MQ=255) cTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGt < 2:301301/143‑1 (MQ=255) cGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCa < 2:98686/150‑1 (MQ=255) gTCCAGGTCCTGGCACCAAAGTTTGTCGCAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCg > 2:174076/1‑150 (MQ=255) tCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCgg > 1:379940/1‑150 (MQ=255) tCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGa > 1:505442/1‑150 (MQ=255) ccTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGaa > 2:381136/1‑150 (MQ=255) gtgatggccagcctgccacgccagtgctatCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACAcg < 2:150940‑M1/43‑1 (MQ=255) gtgatggccagcctgccacgccagtgctatCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACAcg > 1:150940‑M1/31‑73 (MQ=255) cGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCtt > 2:203305/1‑150 (MQ=255) aaCGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCgg > 2:22609/1‑122 (MQ=255) aaCGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCgg < 1:22609/122‑1 (MQ=255) gagctCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGtat < 1:470717‑M1/145‑1 (MQ=255) gCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGtat > 1:45513/1‑150 (MQ=255) | AGGTCAAAGCGGCCGCCGGGCCAGTCCCCCGGTAACCGGGCCCGTTCGACCGAGGCATTGTGCACGTGAGCCAGGCGTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGTAT > NC_002947/3691539‑3691829 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |