New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3691685 =	17 (0.900)	3 (0.170)	3/232	NT	14.3%	coding (177/600 nt)	PP_3257	putative Methyltransferase
	?	NC_002947	3691733 =	20 (1.130)					coding (129/600 nt)	PP_3257	putative Methyltransferase

CCGAGGCATTGTGCACGTGAGCCAGGCGTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGTATAGCTCGGCAAAATACTGTGGATCGAGGCTCATGACAGCTCCATTCAAAG  >  NC_002947/3691588‑3691878                                                                                                                                                  |                                                                                                                                                  atacgccaccaatgaagacccttgggcctttcgcacccgctggtacgagaggcgcaaacgcgagctggtgatggccagcctgccacgccagtgctatcagcgcgtgttcgagcctgcttgcgcaaatggcgagctcagcgcgctgagctc                                                                                                                                               <  1:470717‑M2/5‑5 (MQ=255)        aTTGTGCACGTGAGCCAGGCGTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCg                                                                                                                                        >  1:254369/1‑150 (MQ=255)         ttGTGCACGTGAGCCAGGCGTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCCGCCACCCGCTCGGCCCGCAGTGCGCTCAGCTCGCCATTTGCGCAATCAGGCTCGAACACGCGCTGATAGCACTGGCGt                                                                                                                                       <  1:317341/150‑1 (MQ=255)          tgtgCACGTGAGCCAGGCGTTCACTGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTg                                                                                                                                      <  1:445287/150‑1 (MQ=255)                 gTGAGCCAGGCGTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCt                                                                                                                               >  1:98686/1‑150 (MQ=255)                            gTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCa                                                                                                                    >  1:296608/1‑150 (MQ=255)                                           cTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGt                                                                                                            <  2:301301/143‑1 (MQ=255)                                           cTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGt                                                                                                            >  1:301301/1‑143 (MQ=255)                                                     cGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCa                                                                                           <  2:98686/150‑1 (MQ=255)                                                        gTCCAGGTCCTGGCACCAAAGTTTGTCGCAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCg                                                                                        >  2:174076/1‑150 (MQ=255)                                                         tCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCgg                                                                                       >  1:379940/1‑150 (MQ=255)                                                               tCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGa                                                                                 >  1:505442/1‑150 (MQ=255)                                                                ccTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGaa                                                                                >  2:381136/1‑150 (MQ=255)                                                                               cGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCtt                                                                 >  2:203305/1‑150 (MQ=255)                                                                                     aaCGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCgg                                                                                       <  1:22609/122‑1 (MQ=255)                                                                                     aaCGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCgg                                                                                       >  2:22609/1‑122 (MQ=255)                                                                                             gagctCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGtat                                                   <  1:470717‑M1/145‑1 (MQ=255)                                                                                             gCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGtat                                                   >  1:45513/1‑150 (MQ=255)                                                                                                    gcgcgtgttcgagcctgcttgcgcaaatggcgagctcagcgcgctgATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGTATAGCTCgg                                            >  2:52536‑M2/47‑150 (MQ=255)                                                                                                       cgtgttcgagcctgcttgcgcaaatggcgagctcagcgcgctgATAGCACTGGCGTGGCAGGCTGGCCATCAc                                                                                                                      <  2:150940‑M2/30‑1 (MQ=255)                                                                                                       cgtgttcgagcctgcttgcgcaaatggcgagctcagcgcgctgATAGCACTGGCGTGGCAGGCTGGCCATCAc                                                                                                                      >  1:150940‑M2/44‑73 (MQ=255)                                                                                                             gCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGtata                                                  >  1:62783/1‑135 (MQ=255)                                                                                                             gCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGtata                                                  <  2:62783/135‑1 (MQ=255)                                                                                                                 gCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGTATAGCTCGGCAAAATACTGTgg                               >  1:499738/1‑150 (MQ=255)                                                                                                                             aGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGTATAGCTCGGCAAAATACTGTGGATCGAGGCTCAt                   <  2:379940/150‑1 (MQ=255)                                                                                                                                      gAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGTATAGCTCGGCAAAATACTGTGGATCGAGGCTCATGACAGCTcc          >  2:294145/1‑150 (MQ=255)                                                                                                                                             cgctgATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGTATAGCTCGGCAAAATACTGTGGATCGAGGCTCATGACAGCTCCATTCaaa   <  2:203079‑M2/145‑1 (MQ=255)                                                                                                                                              gctgATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGTATAGCTCGGCAAAATACTGTGGATCGAGGCTCATGACAGCTCCATTCAAAg  <  2:499738‑M2/146‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                  CCGAGGCATTGTGCACGTGAGCCAGGCGTTCACGGGCCAGGCCTACGGCCGTCGGGTCCAGGTCCTGGCACAGCAGTTCGGCACAACGCTCGGCCAGCAGCGCGCTGAGCTCGCCATTTGCGCAAGCAGGCTCGAACACGCGCTGATAGCACTGGCGTGGCAGGCTGGCCATCACCAGCTCGCGTTTGCGCCTCTCGTACCAGCGGGTGCGAAAGGCCCAAGGGTCTTCATTGGTGGCGTATAGCTCGGCAAAATACTGTGGATCGAGGCTCATGACAGCTCCATTCAAAG  >  NC_002947/3691588‑3691878

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.