| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 785264 | 18 (0.960) | 4 (0.230) | 4/232 | NT | 17.0% | coding (665/3831 nt) | PP_0672 | sensory box protein |
| ? | NC_002947 | = 785293 | 22 (1.240) | coding (636/3831 nt) | PP_0672 | sensory box protein | |||||
ACTTGCCGAGCAGCGCCGGCAATAATTTTTGCTGGGCCAGTTTGGCGTCGAACAGACCGCGTAGCTGCCAGGTGCTGTTTTCGATAAAGGCCAGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAGGGTGAGCTCGCGGTAATAGTCCGGTGACAGGCGCAGCAGCCAGTAGCCGCTACCCTGTGCGGCATCCTGGCGCAG > NC_002947/785154‑785439 | aCTTGCCGAGCAGCGCCGGCAATAATTTTTGCTGGGCCAGATTGGCGTCGAACAGACCGCGTAGCTGCCAGGTGCTGTTTTCGATAAAGGCCAGCAGCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTgcagca > 1:484845/1‑150 (MQ=255) ccGAGCAGCGCCGGCAATAATTTTTGCTGGGCCAGTTTGGCGTCGAACAGACCGCGTAGCTGCCAGGTGCTGTTTTCGATAAAGGCCAGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTcg > 2:79743/1‑150 (MQ=255) cGAGCAGCGCCGGCAATAATTTTTGCTGGGCCAGTTTGGCGTCGAACAGACCGCGTAGCTGCCAGGTGCTGTTTTCGATAAAGGCCAGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTcgc < 2:459204/150‑1 (MQ=255) agCAATAATTTTTGCTGGGCCAGTTTGGCGTCGAACAGACCGCGTAGCTGCCAGGTGCTGTTTTCGATAAAGGCCAGCATCACGCTTTGCAGCGGCTCGTCGCTGTTGTCGGCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTg > 2:32344/2‑150 (MQ=255) taatTTTTGCTGGGCCAGTTTGGCGTCGAACAGACCGCGTAGCTGCCAGGTGCTGTTTTCGATAAAGGCCAGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTc < 2:167679/150‑1 (MQ=255) cAGACCGCGTAGCTGCCAGGTGCTGTTTTCGATAAAGGCCAGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTc > 1:186537/1‑150 (MQ=255) cAGACCGCGTAGCTGCCAGGTGCTGTTTTCGATAAAGGCCAGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTc < 1:79743/150‑1 (MQ=255) cTGTTTTCGATAAAGGCCAGCATCACGCTTTGCAGACGGACTTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAGGGTGAGCTCGCgg < 1:281078/150‑1 (MQ=255) tCGATAAAGGCCAGCATCACGCTTTGAGGCTGGTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGGTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAGGGTGAGCTCGCGGTAATAg > 1:347291/1‑150 (MQ=255) aTAAAGGCCCGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTCCAGCCCCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAGGGTGAGCTCGCGGTAACAGTcc > 2:9156/1‑150 (MQ=255) aGGCCAGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTc < 1:296292/85‑1 (MQ=255) aGGCCAGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTc > 2:296292/1‑85 (MQ=255) ccAGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGcgctgcaaagcgtgatgctggcctttatcgaaaacagcacctggcagctacgcggtctgttcgac < 1:426982‑M2/115‑66 (MQ=255) ccAGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGcgctgcaaagcgtgatgctggcctttatcgaaaacagcacctggcagctacgcggtctgttcgac > 2:426982‑M2/1‑50 (MQ=255) cAGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAGGGTGAGCTCGCGGTAATAGTCCGGTGACAg > 2:436654/1‑150 (MQ=255) tttGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGcgctgcaaagcgtgatgctggcctttatcgaaaacagcacctggcagctacgcggtctgttcgacgccaaactggcccagcaaaaattattgccggcgctgctcggcaagtg < 1:502890‑M2/150‑113 (MQ=255) cTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAGGGTGAGCTCGCGGTAATAGTCCGGTGACAGACGCAGCAGCCAGTAGCCGcg > 1:419750/1‑149 (MQ=255) gCTGGTGTCGGCTGCGGCATGGcgctgcaaagcgtgatgctggcctttatcgaaaacagcacctggcagctacgcggtctgttcgacgccaaactggcccagcaaaaattattgccggcgctgctcggcaagtgcctgctggtgctgttc > 2:502890‑M2/1‑22 (MQ=255) ggCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCcag > 1:297007/1‑48 (MQ=255) ggCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCcag < 2:297007/48‑1 (MQ=255) ggCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAGGGTGAGCTCGCGGTAATAGTCCGGTGACAGGCGCAGCAGCCAGTAGCCGCTACCCTGTGCGGCATc < 2:348828/150‑1 (MQ=255) ggCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAGGGTGAGCTCGCGGTAATAGTCCGGTGACAGgc > 2:203637/1‑110 (MQ=255) ggCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACGGCCCTCGAGGTGGAGGGTGAGCTCGCGGTAATAGTCCGGTGACAGgc < 1:203637/110‑1 (MQ=255) gCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAg < 2:280443/77‑1 (MQ=255) gCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAg > 1:280443/1‑77 (MQ=255) gCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAGGGTGAGCTCGCGGTAATAGTCCGGTGACAGGCGCAGCAGCCAGTAGCCGCTACCCTGTGCGGCATCCTGgcgc > 2:378567/1‑150 (MQ=255) gCATGGAGATGCAGAACATCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAGGGTGAGCTCGCGGTAATAGTCCGGTGACAGGCGCAGCAGCCAGTAGCCGCTACCCTGTGCGGCATCCTGgcgc > 2:378422/1‑150 (MQ=255) aTGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAGGGTGAGCTCGCGGTAATAGTCCGGTGACAGGCGCAGCAGCCAGTAGCCGCTACCCTGTGCGGCATCCTGGCgcag < 2:186537/150‑1 (MQ=255) | ACTTGCCGAGCAGCGCCGGCAATAATTTTTGCTGGGCCAGTTTGGCGTCGAACAGACCGCGTAGCTGCCAGGTGCTGTTTTCGATAAAGGCCAGCATCACGCTTTGCAGCGGCTCGTCGCTGGTGTCGGCTGCGGCATGGCGCTGCAGCACCTCGCCGCTGCGGCTGTTTTCCAGCAGCCACTGCGGGTGGCCACTGCCCTCGAGGTGGAGGGTGAGCTCGCGGTAATAGTCCGGTGACAGGCGCAGCAGCCAGTAGCCGCTACCCTGTGCGGCATCCTGGCGCAG > NC_002947/785154‑785439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |