New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	820860 =	25 (1.330)	4 (0.220)	4/240	NT	14.2%	coding (228/2412 nt)	PP_0707	hypothetical protein
	?	NC_002947	820883 =	24 (1.310)					coding (251/2412 nt)	PP_0707	hypothetical protein

TGCCGAGGCGCCCGCACTGGACGAAAACGCCAGCCTCGAACAACTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAGGCCGCTACCCTGACGCAGCAGCGCAAAGCGCTGGAGGCCGAGAAAAAGG  >  NC_002947/820752‑821032                                                                                                                                     |                                                                                                                                                      tGCCGAGGCGCCCGCACTGGACGAAAACGCCAGCCTCGAACAACTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGa                                                                                                                                     <  1:279030/150‑1 (MQ=255) ggCCGAGGCGCCCGCACTGGACGAAAACGCCAGCCTCGAACAACTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGa                                                                                                                                     <  2:126483/149‑1 (MQ=255)  tagcggcctcgtccggctgggccgggccgatgaccttcagctggtcgtcgagttttcccacatcggcagtgcgcagcgcactcaatgcatcagcttgacgctgaacctgcaactgcgcctgggcgcgatgcAGGTTCAGCGTCAAGCTGa                                                                                                                                     <  2:307789‑M2/19‑1 (MQ=255)    cGAGGCGCCCGCACTGGACGAAAACGCCAGCCTCGAACAACTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGc                                                                                                                                  >  1:245399/1‑150 (MQ=255)           cccGCACTGGACGAAAACGCCAGCCTCGAACAACTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGt                                                                                                                           >  2:275046/1‑150 (MQ=255)           cccGCACTGGACGAAAACGCCAGCCTCGAACAACTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGt                                                                                                                           >  2:444080/1‑150 (MQ=255)                              ccAGCCTCGAACAACTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGACGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGAtg                                                                                                        <  1:417554/150‑1 (MQ=255)                                  ccTCGAACAACTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGAtgt                                                                                                       >  1:210847/1‑147 (MQ=255)                                  ccTCGAACAACTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGAtgt                                                                                                       <  2:210847/147‑1 (MQ=255)                                    tCGAACAACTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGaa                                                                                                  >  2:179737/1‑150 (MQ=255)                                      gAACAACTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGaaaa                                                                                                <  1:444080/150‑1 (MQ=255)                                         caacTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTc                                                                                             <  2:113311/150‑1 (MQ=255)                                               gtcgagttttcccacatcggcagtgcgcagcgcactcaatgcatcagcttgacgctgaacctGCAACTGCGCCTGGGCGC‑GATGCAg                                                                                                                                                      <  2:486412‑M1/25‑1 (MQ=255)                                               gtcgagttttcccacatcggcagtgcgcagcgcactcaatgcatcagcttgacgctgaacctGCAACTGCGCCTGGGCGC‑GATGCAg                                                                                                                                                      >  1:486412‑M1/63‑87 (MQ=255)                                                       cTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGCCGACCCGCTgca                                                                               >  2:25689/1‑148 (MQ=255)                                                       cTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGaa                                                                               <  2:245399/150‑1 (MQ=255)                                                       cTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGaa                                                                               <  1:25689/150‑1 (MQ=255)                                                                  tCCGCCAAGGCGTAACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATcggcc                                                                    >  1:125239/1‑150 (MQ=255)                                                                       cAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGTAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATcggcccggcc                                                               >  1:391136/1‑150 (MQ=255)                                                                                    gCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAgg                                                  >  2:316437/1‑150 (MQ=255)                                                                                      gAGGCTAACGACGACGTGCTGTCGCAACTGCCGCCCAGCAC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAGGcc                                                <  2:373827/150‑1 (MQ=255)                                                                                          tcagcttgacgctgaacctGCATC‑GCGCCCAGGCGCAGTTGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAGGCCGCTa                                            <  2:307789‑M1/131‑1 (MQ=255)                                                                                           tAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAGGCCGCTAc                                           >  2:88652/1‑150 (MQ=255)                                                                                              cgacgacgTGCTGTCGCCACTGCGCCTGGGCGC‑GATGCAGTTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCAAACTGCCGATGTTGGAAAACTCGACGACCAGCTGAAGCTCAGCGGCCCCGCCCAGCCGGACGAGGACGCTACCCt                                        <  2:166644/150‑1 (MQ=255)                                                                                                acgacgTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAGGCCGCTACCCTGa                                      <  1:179737/150‑1 (MQ=255)                                                                                                 cgacgTGCTGTCGCAACTGCGCCTGGGCTG‑GATCCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTACTCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAGGCCGCTACCCTGAc                                     <  1:469755/150‑1 (MQ=255)                                                                                                         tGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAGGCCGCTACCCTGACGCagcagc                             <  2:298382/150‑1 (MQ=255)                                                                                                            ctgcatcgcgcccaggcgcagttgcAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTcgac                                                                                          >  1:486412‑M2/26‑87 (MQ=255)                                                                                                            ctgcatcgcgcccaggcgcagttgcAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTcgac                                                                                          <  2:486412‑M2/62‑1 (MQ=255)                                                                                                               catcgcgcccaggcgcagttgcAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAGGCCGCTACCCTGACGCAGCAGCGCaaa                        <  1:307789‑M2/128‑1 (MQ=255)                                                                                                                       cTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAGGCCGCTACCCTGACGCAGCAGCGCAAAGCGCTGGAg               >  2:373058/1‑150 (MQ=255)                                                                                                                             gc‑gATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAGGCCGCTACCCTGACGCAGCAGCGCAAAGCGCTGGAGGCCgag         >  2:241551/1‑150 (MQ=255)                                                                                                                                    cAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTAAATATCATCGGCCCGGCCCAGCCGGACGAGGCCGCTACCCTGACGCAGCAGCGCAAAGCGCTGGAGGCCGAGAAAAAg   <  1:316437‑M2/149‑1 (MQ=255)                                                                                                                                     aGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAGGCCGCTACCCTGACGCAGCAGCGCAAAGCGCTGGAGGCCGAGAAAAAgg  <  1:326462/150‑1 (MQ=255)                                                                                                                                     |                                                                                                                                                      TGCCGAGGCGCCCGCACTGGACGAAAACGCCAGCCTCGAACAACTGAGCGACCGCTTGGACCTCATCCGCCAAGGCGTCACCAGCGAGGCTAACGACGACGTGCTGTCGCAACTGCGCCTGGGCGC‑GATGCAGGTTCAGCGTCAAGCTGATGCATTGAGTGCGCTGCGCACTGCCGATGTGGGAAAACTCGACGACCAGCTGAAGGTCATCGGCCCGGCCCAGCCGGACGAGGCCGCTACCCTGACGCAGCAGCGCAAAGCGCTGGAGGCCGAGAAAAAGG  >  NC_002947/820752‑821032

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.