| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1273270 | 24 (1.280) | 5 (0.300) | 5/216 | NT | 18.2% | intergenic (+55/+113) | PP_1113/PP_1114 | pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein |
| ? | NC_002947 | = 1273329 | 24 (1.460) | intergenic (+114/+54) | PP_1113/PP_1114 | pyridoxal‑phosphate dependent enzyme family protein/SEC‑C domain‑containing protein | |||||
CAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTCCTTCAGGGCGTT > NC_002947/1273193‑1273463 | cAAACCGGCGAAAGGCCGCGTAGCCATCCCTGTCACGCCGCTCTTCCGGACGCGGGCACGGAAACTTGGTGGGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCTCGGGTTCGCGGGCGCGCCCGCTCCcaca < 2:492002/150‑1 (MQ=21) ccGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAgtgt > 1:319710/1‑150 (MQ=255) cGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGtt < 2:139848/150‑1 (MQ=255) aGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑Ca > 2:98179/1‑150 (MQ=255) ctccGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAAATGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCATGGCTGGTGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CAt < 1:474102/148‑1 (MQ=38) gcgTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CAtctct > 1:329457/1‑150 (MQ=255) cgTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGCTTGGCACGTGCTGCTCGCTTTTGCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CAtctctc < 1:9745/150‑1 (MQ=38) ggCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCCGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCGCCCACAGTGTTCGCGC‑CATCTCTCGGATTTTTATCGCGTcc > 1:300719/1‑149 (MQ=255) gCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGt < 1:98179/150‑1 (MQ=255) cTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTg < 2:319710/150‑1 (MQ=255) gCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGt < 1:271510/128‑1 (MQ=255) gCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGt > 2:271510/1‑128 (MQ=255) gcaaaCTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCActtc < 1:433054/148‑1 (MQ=255) gtgGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCgcccgctcccacagtttccgtgccagcctctggatcatgagcctgacacaggtggctacgcggcctttcgccggtttgc < 2:385370‑M2/150‑80 (MQ=255) tgGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTActt > 2:203343/1‑150 (MQ=255) gttgAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTActt > 1:399964/4‑150 (MQ=255) aGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCgcccgctcccacagtttccgtgccagcctctggatcatgagcctgacacaggtggctacgcggcctttcgccggtttgccccca < 2:333368‑M2/150‑85 (MQ=255) aGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACttcttc < 2:94770/150‑1 (MQ=255) cAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCgcccgctcccacagtttccgtgccagcctctggatcatgagcctgacacaggtggctacgcggcctttcgccggtttgcccccaacaggt < 1:481214‑M2/150‑91 (MQ=255) ccGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCgca > 1:323614/1‑150 (MQ=255) cgcgAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAg > 1:462864/1‑111 (MQ=255) cgcgAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAg < 2:462864/111‑1 (MQ=255) cAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGACGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCgcacgggcacg > 2:508101/1‑150 (MQ=255) ggCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGcacgggcacggg < 2:138144/150‑1 (MQ=255) cgGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCCGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTAc < 2:329457/150‑1 (MQ=255) gTGGATGGCACGGGCTTCGCCCGTGTTCGCGGACGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACgg < 1:508101/150‑1 (MQ=255) ggCACGGGCTTCGCCCGTGTTCGCGGGCGCgcccgctcccacagtttccgtgccagcctctggatcatgagcctgacacaggtggctacgcggcctttcgccggtttgcccccaacaggtcctggtaccagaggccggcatcataggcga > 1:333368‑M2/1‑30 (MQ=255) cACGGGCTTCGCCCGTGTTCGCGGGCGCgcccgctcccacagtttccgtgccagcctctggatcatgagcctgacacaggtggctacgcggcctttcgccggtttgcccccaacaggtcctggtaccagaggccggcatcataggcgatg > 1:385370‑M2/1‑28 (MQ=255) gggCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTCCtt > 1:291493/1‑150 (MQ=255) gCTTCGCCCGTGTTCGCGGGCGCGCCCCCACCCCCTG‑CTTCATGCTGATCTCGCATTTTTTTATCGCGTCAGTCGAGCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTCCTTCa < 1:241019/150‑1 (MQ=255) ttCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTCCTTCAgg < 1:461551/150‑1 (MQ=255) ccGTGTTCGCGGGAGCGCCCGCTGCCACAATATTCGAAA‑CATCTCTGAGATTGTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTCCGGCCAACGTCCTTCAGGGCGtt < 2:286167/150‑1 (MQ=255) | CAAACCGGCGAAAGGCCGCGTAGCCACCTGTGTCAGGCTCATGATCCAGAGGCTGGCACGGAAACTGTGGGAGCGGGCAAGCCCGCGAAGCAGGCGACGCGGTGGATGGCACGGGCTTCGCCCGTGTTCGCGGGCGCGCCCGCTCCCACAGTGTTCGAGC‑CATCTCTCAGATTTTTATCGCGTCAGTCGATCAGGCGCCGTGGCACTTCTTGTACTTCTTCTCGCTACCGCACGGGCACGGGTCGTTACGGCCAACGTCCTTCAGGGCGTT > NC_002947/1273193‑1273463 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |