New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2615984 | 24 (1.280) | 6 (0.340) | 4/232 | NT | 21.2% | coding (108/1641 nt) | PP_2288 | tail fiber protein |
? | NC_002947 | = 2615995 | 22 (1.240) | coding (119/1641 nt) | PP_2288 | tail fiber protein |
TTTGGAACCCTCTATTTGGCTTACACACCCTACAGCTACGTCCAGTTGAAAGCGGACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCACTCCCAAGGATTCCGCCATTGTTTCTTTCCAGGATGGCTCCACGCTCCTGG > NC_002947/2615862‑2616132 | tttGGAACCCTCTATTTGGCTTACACACCCTACCAAAGTATTCAGTTGAAAGCGGACGGAGCAACCACAAACTTCCCCTTCAACTCCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTgg < 1:155475/150‑1 (MQ=255) tttGGAACCCTCTATTTGGCTTACACACCCTACAGCTACGTCCAGTTGAAAGCGGACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTgg < 1:371370/150‑1 (MQ=255) ttGGAACCCTCTATTTGGCTTACACACCCTACAGCTACGTCCAGTTGCGGGCGTACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTggg < 2:13248/150‑1 (MQ=255) ccTCTATTTGGCTTACACACCCTACAGCTACGTCCAGTTGAAAGCGGACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTc < 1:227385/150‑1 (MQ=255) tttGGCTTACACACCCTACAGCTACGTCCAGTTGAAAGCGGACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTaccc < 2:136664/150‑3 (MQ=255) acacCCTACAGCTACGTCCAGTTGAAAGCGGACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATc > 2:334245/1‑150 (MQ=255) acacCCTACAGCTACGTCCAGTTGAAAGCGGACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATc < 2:85433/150‑1 (MQ=255) cTACAGCTACGTCCAGTTGAAAGCGGACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTACACGATCAGGATCGCCTc > 2:189962/1‑150 (MQ=255) cAGCTACGTCCAGTTGAAAGCGGACGGAGCAACAACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCAAGCTGTCCGTGTACACAGTGGTCACGGACTTCACTTGGATAGATTCGTACACCATCAGGATCGCCTCcgc > 2:144965/1‑150 (MQ=255) aGCGGACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGACCACTGTGTCcacggacacctggat > 1:110504‑M2/1‑84 (MQ=255) aGCGGACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGACCACTGTGTCcacggacacctggat < 2:110504‑M2/99‑16 (MQ=255) aGCGGACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGACCACTGTGTCcacggacacctggat < 2:364147‑M2/99‑16 (MQ=255) aGCGGACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGACCACTGTGTCcacggacacctggat > 1:364147‑M2/1‑84 (MQ=255) gacggaGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCg < 1:358470/105‑1 (MQ=255) gacggaGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCg > 2:358470/1‑105 (MQ=255) aCTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCa > 1:240369/1‑150 (MQ=255) cTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCTGTGGACACAGTGGTCACGGACTTAACTTTTGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCAc < 1:189962/150‑1 (MQ=255) ttCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCACt > 1:481384/1‑150 (MQ=255) cTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGACCACTGTGTCcacggacacctggatat > 1:506046‑M2/1‑57 (MQ=255) cTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGACCACTGTGTCcacggacacctggatat < 2:506046‑M2/74‑18 (MQ=255) aaCTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACtt < 2:169052/67‑1 (MQ=255) aaCTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACtt > 1:169052/1‑67 (MQ=255) ccTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCACTCCCAAGGATTCCGCCa < 2:240369/150‑1 (MQ=255) ggACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCACTCCCAAGGATTCCGCCATTGtttc < 1:58602/150‑1 (MQ=255) cAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCACTCCCAAGGATTCCGCCATTGTTTCTTTCCAGGATGGCTcc > 1:13864/1‑150 (MQ=255) ggTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCACTCCCAAGGATTCCGCCATTGTTTCTTTCCAGGATGGCTCCAc < 2:481384/150‑1 (MQ=255) aagtCCGTGACCACTGTGTCCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCACTCCCAAGGATTCCGCCATTGTTTCTTTCCCGGATGGCTCCACg > 1:78125/3‑150 (MQ=255) tGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCACTCCCAAGGATTCCGCCATTGTTTTTTTCTAGGTTGTTGACACGCTCCTgg > 1:358452/1‑150 (MQ=255) tCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCACTCCCAAGGATTCCGCCATTGTTTCTTTCCAGGa > 1:247241/1‑121 (MQ=255) tCACGGACTTCACGTGGGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCACTCCCAAGGATTCCGCCATTGTTTCTTTCCAGGa < 2:247241/121‑1 (MQ=255) | TTTGGAACCCTCTATTTGGCTTACACACCCTACAGCTACGTCCAGTTGAAAGCGGACGGAGCAACCACAAACTTCCCCTTCAACTTCCCCTACCTGGACACCGCCCATATCCAGGTGTCCGTGGACACAGTGGTCACGGACTTCACTTGGGTAGATTCGTACACCATCAGGATCGCCTCCGCGCCTGTCGCTGGTGGCGTGGTCGAGATTCGCCGGATCACTCCCAAGGATTCCGCCATTGTTTCTTTCCAGGATGGCTCCACGCTCCTGG > NC_002947/2615862‑2616132 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |