New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4117899	23 (1.220)	4 (0.230)	4/232	NT	15.2%	coding (545/2256 nt)	PP_3622	isoquinoline 1‑oxidoreductase subunit beta
	?	NC_002947	= 4117925	23 (1.300)					coding (571/2256 nt)	PP_3622	isoquinoline 1‑oxidoreductase subunit beta

CCACCATGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAGTACTGCATC  >  NC_002947/4117776‑4118065                                                                                                                                                      |                                                                                                                                             ccaccaTGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTgg                                                                                                                                              >  2:448550/1‑150 (MQ=255)    ccaTGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGccg                                                                                                                                           <  2:165449‑M2/150‑4 (MQ=255)    ccaTGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGccg                                                                                                                                           >  1:63091‑M2/1‑147 (MQ=255)                                        tgctgcAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCa                                                                                                       >  2:91265/1‑150 (MQ=255)                                                    gcgcCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTgc                                                                                           <  1:91265/150‑1 (MQ=255)                                                             acCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCcca                                                                                  >  1:409076/1‑150 (MQ=255)                                                               cTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCccagc                                                                                >  2:385441/1‑150 (MQ=255)                                                               cTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGCTGCCCGACCCGGCCTGCGTCAAGCTGCGCGACCccagc                                                                                >  1:246035/1‑150 (MQ=255)                                                                   gtgtACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGt                                                                            >  1:18951/1‑150 (MQ=255)                                                                     gtACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGttt                                                                          <  2:18951/150‑1 (MQ=255)                                                                          ggTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTg                                                                     >  1:223951/1‑150 (MQ=255)                                                                                tGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTgg                                                               >  2:301115/1‑150 (MQ=255)                                                                                   gCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGaaa                                                            <  1:94690/150‑1 (MQ=255)                                                                                      ttCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGcc                                                         <  1:34801/150‑1 (MQ=255)                                                                                        cTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCg                                                       <  1:168532/150‑1 (MQ=255)                                                                                         tACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGt                                                      <  1:448550/150‑1 (MQ=255)                                                                                                   ggTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTg                                            >  1:420694/1‑150 (MQ=255)                                                                                                      aaCGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGAt                                         <  1:505585/150‑1 (MQ=255)                                                                                                         gtagtaCATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGcc                                      >  1:447010/1‑150 (MQ=255)                                                                                                          tagtaCATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCt                                     <  1:501572/150‑1 (MQ=255)                                                                                                              aCATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGa                                 >  2:507603/1‑150 (MQ=255)                                                                                                                aTACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGccggtcgtggtatgtactacgttacccggtgtggtagaaagctcatcgaccggtacacccaggtgttcggcgc                                                                     <  2:348565‑M2/112‑74 (MQ=255)                                                                                                                aTACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGccggtcgtggtatgtactacgttacccggtgtggtagaaagctcatcgaccggtacacccaggtgttcggcgc                                                                     >  1:348565‑M2/1‑39 (MQ=255)                                                                                                                   ccACGACCGGACGTTCCGTACCCTACGGTGAGCTGGccggtcgtggtatgtactacgttacccggtgtggtagaaagctcatcgaccggtacacccaggtgttcggcgcccgcctgcagcagcatgccccgggcgagcgcgcccagacg                             >  1:54615‑M2/1‑36 (MQ=255)                                                                                                                   ccACGACCGGACGTTCCGTACCCTACGGTGAGCTGGccggtcgtggtatgtactacgttacccggtgtggtagaaagctcatcgaccggtacacccaggtgttcggcgcccgcctgcagcagcatgccccgggcgagcgcgcccagacg                             <  2:54615‑M2/149‑114 (MQ=255)                                                                                                                        aCCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCAcc                       <  2:420694/150‑1 (MQ=255)                                                                                                                                    gTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAg           <  2:447010/150‑1 (MQ=255)                                                                                                                                        ccTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCa            >  1:406330/1‑145 (MQ=255)                                                                                                                                        ccTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCa            <  2:406330/145‑1 (MQ=255)                                                                                                                                             ggTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCCACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAGTACTGCATc  <  1:33472/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                             CCACCATGCGCCGTCTGGGCGCGCTCGCCCGGGGCATGCTGCTGCAGGCGGGCGCCGAACACCTGGGTGTACCGGTCGATGAGCTTTCTACCACACCGGGTAACGTAGTACATACCACGACCGGACGTTCCGTACCCTACGGTGAGCTGGCCGGTCGCGCCATGGACCTGCCGGTGCCCGACCCGGCCAGCGTCAAGCTGCGCGACCCCAGCCAGTTTCGCTGGATTGGAAAGCCCGTACGCCGCCTGGATGCCTACGACAAGTCCACCGGCAAGGCCCAGTACTGCATC  >  NC_002947/4117776‑4118065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.