| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4721206 | 16 (0.540) | 6 (0.210) | 6/268 | 2.6 | 26.5% | coding (436/726 nt) | PP_4178 | dienelactone hydrolase family protein |
| ? | NC_002947 | = 4721212 | 18 (0.630) | coding (430/726 nt) | PP_4178 | dienelactone hydrolase family protein | |||||
ACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4721056‑4721206‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtgTCGTTCCACGGCACCCTGGACACGCCGAATCCTGAAGATGCCAAGCGCATCAAGGGCTCGGTGCTGGTGTTGCATGGTGCCTCCGATCCATTGGTGCCTAAAGAGCAGCTGCCGGCATTCGAAGACGAGATGAACGCGGCCAAGG < NC_002947/4721212‑4721068 ACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGT > 2:15488/1‑150 CCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGTCGTTCCACGG > 2:525597/1‑150 TGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGTCGTTCCACGGCAC < 1:525597/150‑1 CTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGT > 1:28146/1‑96 CTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGT < 2:28146/96‑1 ATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCACCCTGGACACGCCGAATCCTGAAGAT > 1:646301/1‑120 ATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGGAACGACACGGCACCCTGGACACGCCGAATCCTGAAGAT < 2:646301/120‑1 GCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGTCGTTCCACGGCA > 1:198878/1‑53 GCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTGTCGTTCCACGGCA < 2:198878/53‑1 CCGTGTCGTTCCACGGCACCCTGGACACGCCGAATCCTGAAGATGCCAAGCGCATCAAGGGCTCGGTGCTGGTGTTGCATGGTGCCTCCGATCCATTGGTGCCTAAAGAGCAGCTGCCGGCATTCGAAGACGAGATGAACGCGGCCAAGG < 2:141078/150‑1 CCGTGTCGTTCCACGGCACCCTGGACACGCCGAATCCTGAAGATGCCAAGCGCATCAAGGGCTCGGTGCTGGTGTTGCATGGTGCCTCCGATCCATTGGTGCCTAAAGAGCAG > 1:357256/1‑113 CCGTGTCGTTCCACGGCACCCTGGACACGCCGAATCCTGAAGATGCCAAGCGCATCAAGGGCTCGGTGCTGGTGTTGCATGGTGCCTCCGATCCATTGGTGCCTAAAGAGCAG < 2:357256/113‑1 ACTGCCAGTCCACCTTGGCCGCGTTCATCTCGTCTTCGAATGCCGGCAGCTGCTCTTTAGGCACCAATGGATCGGAGGCACCATGCAACACCAGCACCGAGCCCTTGATGCGCTTGGCATCTTCAGGATTCGGCGTGTCCAGGGTGCCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4721056‑4721206‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtgTCGTTCCACGGCACCCTGGACACGCCGAATCCTGAAGATGCCAAGCGCATCAAGGGCTCGGTGCTGGTGTTGCATGGTGCCTCCGATCCATTGGTGCCTAAAGAGCAGCTGCCGGCATTCGAAGACGAGATGAACGCGGCCAAGG < NC_002947/4721212‑4721068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |