New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5477138 = | 40 (1.340) | 9 (0.430) | 7/198 | 1.6 | 33.2% | intergenic (+3/+109) | PP_4813/PP_4814 | PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein |
? | NC_002947 | 5477237 = | 8 (0.380) | intergenic (+102/+10) | PP_4813/PP_4814 | PAP2 family protein/DedA family protein/ATP‑dependent protease La domain‑containing protein |
ATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGAT > NC_002947/5477094‑5477377 | atgcatgcGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGaa > 2:411065/1‑150 (MQ=255) tgctggagcggattcagggggagttgttcgcctgatggttctgtattgcctgtgccggcctattcgcgggtaaacccgctcctacgcacgggatcgcgcttatcgtaggagcgggtttacccgcgaataggccggcacaggcaaTACAGa < 2:109635‑M2/6‑1 (MQ=255) cGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGaac > 1:530196/1‑150 (MQ=255) cGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGaac < 2:530196/150‑1 (MQ=255) cAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGaacaa < 2:543453/150‑1 (MQ=255) cAGGTAGCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGATAAACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGaa < 2:256995/150‑1 (MQ=255) gTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATcc < 1:411065/150‑1 (MQ=255) tctgtaTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGATAAGCGCGATCCCG‑TG‑‑CGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCcagca < 2:109635‑M1/144‑1 (MQ=255) TGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGAtc > 2:442663‑M1/1‑150 (MQ=255) TGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGAtctc < 1:454357‑M1/150‑1 (MQ=255) GCCTATTCGCGGGTAAACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCa > 2:454357‑M1/1‑150 (MQ=255) CCTATTCGCGGGTAAACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTcgccccg < 2:339641‑M1/150‑3 (MQ=255) ttcgcgggtaaacccgctcctacgataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaaTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCgc < 1:109635‑M2/68‑1 (MQ=255) gtaaacccgctcctacgataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaaTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCtgtg > 2:675343‑M2/76‑150 (MQ=255) AACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCg < 1:646704‑M1/150‑1 (MQ=255) taaacccgctcctacgataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaaTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTgg > 2:306333‑M2/75‑150 (MQ=255) CCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAAt < 1:276289‑M1/150‑1 (MQ=255) ccgctcctacgataagcgcgatccggtgcgtaggagcgggtttacccgcgaataggccggcacaggcaaTACAGAACCATCAGGCGAACAACTCTCGCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAAt > 2:201685‑M2/70‑150 (MQ=255) ccgctcctacgataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaaTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTgg > 2:471739‑M2/70‑122 (MQ=255) ccgctcctacgataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaaTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTgg < 1:471739‑M2/53‑1 (MQ=255) ccgctcctacgataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaaTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCCGCTGTGGCGAAt > 1:583229‑M2/70‑150 (MQ=255) cgctcctacgataagcgcgatcccgtgcgtaggagcgggtttacccgcgaataggccggcacaggcaaTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATc > 1:333258‑M2/69‑150 (MQ=255) ttATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAgg < 1:142356/131‑1 (MQ=255) ttATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAgg > 2:142356/1‑131 (MQ=255) taggagcgggtttacccgcgaataggccggcacaggcaaTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCtt > 2:111878‑M2/40‑150 (MQ=255) ggtttacccgcgaataggccggcacaggcaaTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAAc < 1:354119‑M2/119‑1 (MQ=255) aTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCTAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGAt < 2:347726‑M2/141‑1 (MQ=255) aTACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCTAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGAt > 1:347726‑M2/2‑142 (MQ=255) | ATGCATGCGTTGCCGCAGGCGTTGGTCAGGTATCAATATTGATGTTGCCTGTGCCGGCCTATTCGCGGGTAAACCCGCTCCTACGC‑A‑‑CGGGATCGCGCTTATCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGCACAGGCAATACAGAACCATCAGGCGAACAACTCCCCCTGAATCCGCTCCAGCAGCTTCTGGATCTCGCCCAGCCGCTGCTGTGGCGAATCGAGGGTCAGCAGGTCCAGCTTGTCCTCTTCCATGAACGGCAACAGGTACGCCAGCTGAT > NC_002947/5477094‑5477377 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |